RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 RAB38P57729 211 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 STX4Q12846 297 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 DHRS2Q13268 280 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 GUSBP1Q15486 140 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 ACTL10Q5JWF8 245 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 ZNF773Q6PK81 442 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 FAM19A1Q7Z5A9 133 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 DPPA2Q7Z7J5 298 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 SPICQ8N5J4 248 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 DRAXINQ8NBI3 349 aaPredicted RBP1.5□□□□□ -2.17
LTN1-204ENST00000475344 OR6K3Q8NGY3 331 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 BLNKQ8WV28 456 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 CCL17Q92583 94 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 BIRC8Q96P09 236 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 COPS4Q9BT78 406 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 HIGD2AQ9BW72 106 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 DSN1Q9H410 356 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 METTL8Q9H825 291 aaKnown RBP1.5□□□□□ -2.17
LTN1-204ENST00000475344 ZNF443Q9Y2A4 671 aaPredicted RBP1.5□□□□□ -2.17
LTN1-204ENST00000475344 POLR3AO14802 1390 aaPredicted RBP1.49□□□□□ -2.17
LTN1-204ENST00000475344 ADAMTSL3P82987 1691 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 YLPM1P49750 1951 aaKnown RBP1.49□□□□□ -2.17
LTN1-204ENST00000475344 A0A1B0GU33 70 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 A0A1B0GXF2 115 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 SDHAF1A6NFY7 115 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 OVOL1O14753 267 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 PDYNP01213 254 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 IGKV1D-33P01593 117 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 IGKV1-33P01594 117 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 TRGV3P03979 118 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 SLC2A1P11166 492 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 GTF2F2P13984 249 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 NUP62P37198 522 aaPredicted RBP1.49□□□□□ -2.17
LTN1-204ENST00000475344 RANBP1P43487 201 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 XIAPP98170 497 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 TMEM241Q24JQ0 296 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 GOLGA7BQ2TAP0 167 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 ST13P4Q8IZP2 240 aaPredicted RBP1.49□□□□□ -2.17
LTN1-204ENST00000475344 OR2M3Q8NG83 312 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 CASTOR1Q8WTX7 329 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 OLFM3Q96PB7 478 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 TRIB3Q96RU7 358 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 PITX2Q99697 317 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 ANAPC13Q9BS18 74 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 RMND1Q9NWS8 449 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 NAGKQ9UJ70 344 aa1.49□□□□□ -2.17
LTN1-204ENST00000475344 ZNF706Q9Y5V0 76 aaPredicted RBP1.49□□□□□ -2.17
LTN1-204ENST00000475344 RBFOX3A6NFN3 312 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 A8MWP4 228 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 UBDO15205 165 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 TCF21O43680 179 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 PSIP1O75475 530 aaKnown RBP1.48□□□□□ -2.17
LTN1-204ENST00000475344 SC5DO75845 299 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 MYO1DO94832 1006 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 GIMD1P0DJR0 217 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 GTF2H1P32780 548 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 RPA3P35244 121 aaPredicted RBP1.48□□□□□ -2.17
LTN1-204ENST00000475344 LGALS7P47929 136 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 TSPAN5P62079 268 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 VSNL1P62760 191 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 BAXQ07812 192 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 PYCR3Q53H96 274 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 ERICH5Q6P6B1 374 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 SSX6Q7RTT6 188 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 Q8NAQ8 132 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 OR4K17Q8NGC6 315 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 OR2K2Q8NGT1 345 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 TWIST2Q8WVJ9 160 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 SLC25A44Q96H78 314 aaPredicted RBP1.48□□□□□ -2.17
LTN1-204ENST00000475344 BEX2Q9BXY8 128 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 GABARAPL1Q9H0R8 117 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 RBM12B-AS1Q9P1G2 102 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 DOCK6Q96HP0 2047 aa1.48□□□□□ -2.17
LTN1-204ENST00000475344 PRRC2BQ5JSZ5 2229 aaKnown RBP1.47□□□□□ -2.17
LTN1-204ENST00000475344 IGHV1-45A0A0A0MS14 117 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 A0A0B4J2C4 111 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 H3BMM0 161 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 POP7O75817 140 aaKnown RBP1.47□□□□□ -2.17
LTN1-204ENST00000475344 GPR75O95800 540 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 OPN1SWP03999 348 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 IVLP07476 585 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 CCDC172P0C7W6 258 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 PSMB9P28065 219 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 C2orf80Q0P641 193 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 CASP8Q14790 479 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 MMDQ15546 238 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 BCL2A1Q16548 175 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 C18orf21Q32NC0 220 aaPredicted RBP1.47□□□□□ -2.17
LTN1-204ENST00000475344 HBMQ6B0K9 141 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 PDCL2Q8N4E4 241 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 OR8G5Q8NG78 346 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 MUC7Q8TAX7 377 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 OR5P3Q8WZ94 311 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 UBE2WQ96B02 151 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 FXYD5Q96DB9 178 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 MSANTD3Q96H12 275 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 FMC1Q96HJ9 113 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 SUCNR1Q9BXA5 334 aa1.47□□□□□ -2.17
LTN1-204ENST00000475344 RAB1BQ9H0U4 201 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms