RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PHLDA2Q53GA4 152 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 ADPRHL1Q8NDY3 354 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 OR5L1Q8NGL2 311 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 TP53RKQ96S44 253 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 PHPT1Q9NRX4 125 aaPredicted RBP11.23□□□□□ -0.61
PRPF4-201ENST00000374198 CCL25O15444 150 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 MT-ATP6P00846 226 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 HRASP01112 189 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 CEACAM5P06731 702 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 MTCP1P56278 107 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 TAS2R30P59541 319 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 FMODQ06828 376 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 ZNF77Q15935 545 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 CDCP2Q5VXM1 449 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 TOMM20LQ6UXN7 152 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 TEX43Q6ZNM6 134 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 CISD2Q8N5K1 135 aaKnown RBP11.22□□□□□ -0.61
PRPF4-201ENST00000374198 OR10S1Q8NGN2 331 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 SLAMF6Q96DU3 332 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 IMMP2LQ96T52 175 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 ZFYVE21Q9BQ24 234 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 ANXA10Q9UJ72 324 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 TRBV11-1A0A0K0K1C0 115 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 TGFBR3LH3BV60 316 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 YPEL1O60688 119 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 CST7O76096 145 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
PRPF4-201ENST00000374198 IGHMP01871 453 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 ZNF787Q6DD87 383 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 SLC35E1Q96K37 410 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 YPEL2Q96QA6 119 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 HDAC8Q9BY41 377 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 NXT1Q9UKK6 140 aaKnown RBP11.22□□□□□ -0.61
PRPF4-201ENST00000374198 K7EP13 123 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 NKX2-1P43699 371 aaPredicted RBP11.22□□□□□ -0.61
PRPF4-201ENST00000374198 GPR3P46089 330 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 SEC13P55735 322 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 KLF3P57682 345 aaPredicted RBP11.22□□□□□ -0.61
PRPF4-201ENST00000374198 ZNF92Q03936 586 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 BSXQ3C1V8 233 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 RIPPLY2Q5TAB7 128 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 PARM1Q6UWI2 310 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 C1QL2Q7Z5L3 287 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 COMMD2Q86X83 199 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 ODF3L1Q8IXM7 274 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 UBALD2Q8IYN6 164 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 TMEM256Q8N2U0 113 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 TMEM217Q8N7C4 229 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 ZNF845Q96IR2 970 aaPredicted RBP11.22□□□□□ -0.61
PRPF4-201ENST00000374198 HDHD3Q9BSH5 251 aaPredicted RBP11.22□□□□□ -0.61
PRPF4-201ENST00000374198 SLC2A9Q9NRM0 540 aa11.22□□□□□ -0.61
PRPF4-201ENST00000374198 DOCK8Q8NF50 2099 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 YLPM1P49750 1951 aaKnown RBP11.21□□□□□ -0.61
PRPF4-201ENST00000374198 NKX2-6A6NCS4 301 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 A8MXE2 369 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 SSSCA1O60232 199 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 TYMSP04818 313 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 TDGF1P13385 188 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 CEACAM8P31997 349 aaPredicted RBP11.21□□□□□ -0.61
PRPF4-201ENST00000374198 KIR2DS3Q14952 304 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 TMEM183BQ1AE95 376 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 CYP2G1PQ6ZSU1 146 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 GRINAQ7Z429 371 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 C6orf201Q7Z4U5 140 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 SUMF1Q8NBK3 374 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 OR5D18Q8NGL1 313 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 OR2T10Q8NGZ9 312 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 FGF14Q92915 247 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 SMIM7Q9BQ49 75 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 OR10A5Q9H207 317 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 RBKSQ9H477 322 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 NOTCH4Q99466 2003 aa11.21□□□□□ -0.61
PRPF4-201ENST00000374198 CEBPZOSA8MTT3 80 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 PLPP3O14495 311 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 PHF1O43189 567 aaPredicted RBP11.21□□□□□ -0.62
PRPF4-201ENST00000374198 NUPR1O60356 82 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 NXPH2O95156 264 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 ZNF205O95201 554 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 CDS2O95674 445 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 EML2O95834 649 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 DDAH2O95865 285 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 FXYD4P59646 89 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 DNM1P34Q6PK57 102 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 TIPARPQ7Z3E1 657 aaKnown RBP11.21□□□□□ -0.62
PRPF4-201ENST00000374198 ABHD12BQ7Z5M8 362 aaPredicted RBP11.21□□□□□ -0.62
PRPF4-201ENST00000374198 SLC38A9Q8NBW4 561 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 SSC4DQ8WTU2 575 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 FAM3CQ92520 227 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 IL22RA2Q969J5 263 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 AGMATQ9BSE5 352 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 GSX1Q9H4S2 264 aaPredicted RBP11.21□□□□□ -0.62
PRPF4-201ENST00000374198 ZNF581Q9P0T4 197 aa11.21□□□□□ -0.62
PRPF4-201ENST00000374198 ZNF850A8MQ14 1090 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 WISP1O95388 367 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 LCN15Q6UWW0 184 aa11.2□□□□□ -0.62
PRPF4-201ENST00000374198 ALKBH3Q96Q83 286 aaPredicted RBP11.2□□□□□ -0.62
PRPF4-201ENST00000374198 RASL10BQ96S79 203 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms