RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 RBM39Q14498 530 aaKnown RBP9.92□□□□□ -0.82
CLN6-223ENST00000637823 PDCD1Q15116 288 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 AGAP6Q5VW22 663 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 Q6P435 159 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 GDPD3Q7L5L3 318 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 RTN4RL2Q86UN3 420 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 ZCCHC24Q8N2G6 241 aaKnown RBP9.92□□□□□ -0.82
CLN6-223ENST00000637823 CENPSQ8N2Z9 138 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 TMEM229BQ8NBD8 167 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 NUDCD2Q8WVJ2 157 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 HPS1Q92902 700 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 SULT4A1Q9BR01 284 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 IFT46Q9NQC8 304 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 CBLN4Q9NTU7 201 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 ZNF581Q9P0T4 197 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 IL36RNQ9UBH0 155 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 PPP1R3CQ9UQK1 317 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 CACNG2Q9Y698 323 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 DSCAMO60469 2012 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 USP9XQ93008 2570 aaPredicted RBP9.91□□□□□ -0.82
CLN6-223ENST00000637823 RELNP78509 3460 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 UBE2QL1A1L167 161 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 NAP1L6A6NFF2 107 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 LRRC30A6NM36 301 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 RNF224P0DH78 156 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 IRF2P14316 349 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 FAUP35544 74 aaKnown RBP9.91□□□□□ -0.82
CLN6-223ENST00000637823 RFX2P48378 723 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 PPOXP50336 477 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 TAS2R19P59542 299 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 GMFBP60983 142 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 OXA1LQ15070 435 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 BRICD5Q6PL45 260 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 DCDC5Q6ZRR9 648 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 GCSAMQ8N6F7 178 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 SUMF2Q8NBJ7 301 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 CMSS1Q9BQ75 279 aaKnown RBP9.91□□□□□ -0.82
CLN6-223ENST00000637823 CHST6Q9GZX3 395 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 WDR13Q9H1Z4 485 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 SAP30LQ9HAJ7 183 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 HRASLSQ9HDD0 168 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 AK3Q9UIJ7 227 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 ANAPC10Q9UM13 185 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 NPTNQ9Y639 398 aa9.91□□□□□ -0.82
CLN6-223ENST00000637823 TRAV24A0A0B4J272 114 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 CLEC18AA5D8T8 446 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 ZNF736B4DX44 427 aaPredicted RBP9.9□□□□□ -0.82
CLN6-223ENST00000637823 C3orf80F5H4A9 247 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 OR2H2O95918 312 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 HAND1O96004 215 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 AKAIN1P0CW23 69 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 ZNF44P15621 663 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 DTYMKP23919 212 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 LMO1P25800 156 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 CLEC18BQ6UXF7 455 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 Q6ZNX1 250 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 NRARPQ7Z6K4 114 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 DTX2Q86UW9 622 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 HOGA1Q86XE5 327 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 GVQW1Q8N7I0 195 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 CLEC18CQ8NCF0 446 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 DPCDQ9BVM2 203 aaPredicted RBP9.9□□□□□ -0.82
CLN6-223ENST00000637823 RIMS4Q9H426 269 aaPredicted RBP9.9□□□□□ -0.82
CLN6-223ENST00000637823 DNAJB11Q9UBS4 358 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 OR14J1Q9UGF5 321 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 RALYQ9UKM9 306 aaKnown RBP9.9□□□□□ -0.82
CLN6-223ENST00000637823 WIPI2Q9Y4P8 454 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 LRBAP50851 2863 aa9.9□□□□□ -0.82
CLN6-223ENST00000637823 HRNRQ86YZ3 2850 aaPredicted RBP9.9□□□□□ -0.82
CLN6-223ENST00000637823 SMG1Q96Q15 3661 aaKnown RBP9.89□□□□□ -0.83
CLN6-223ENST00000637823 FAM240BA0A1B0GVZ2 78 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 FAM221AA4D161 298 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 RFPL4AA6NLU0 287 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 POM121CA8CG34 1229 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 RFPL4AL1F8VTS6 287 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.89□□□□□ -0.83
CLN6-223ENST00000637823 SLC33A1O00400 549 aaPredicted RBP9.89□□□□□ -0.83
CLN6-223ENST00000637823 CD8AP01732 235 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 MT-ND4P03905 459 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 CD74P04233 296 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 CD3DP04234 171 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 DANCRP0C864 163 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 EGR1P18146 543 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 TBPP20226 339 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 PRDX2P32119 198 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 MDH2P40926 338 aaKnown RBP9.89□□□□□ -0.83
CLN6-223ENST00000637823 SHEQ5VZ18 495 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 C11orf71Q6IPW1 123 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 STEAP1BQ6NZ63 245 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 CCBE1Q6UXH8 406 aaPredicted RBP9.89□□□□□ -0.83
CLN6-223ENST00000637823 C1orf87Q8N0U7 546 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 BOLLQ8N9W6 283 aaKnown RBP9.89□□□□□ -0.83
CLN6-223ENST00000637823 DUSP18Q8NEJ0 188 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 ENKURQ8TC29 256 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 NEK7Q8TDX7 302 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 RDH5Q92781 318 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 VRK1Q99986 396 aaPredicted RBP9.89□□□□□ -0.83
CLN6-223ENST00000637823 ST6GALNAC5Q9BVH7 336 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 RAB1BQ9H0U4 201 aa9.89□□□□□ -0.83
CLN6-223ENST00000637823 TREM2Q9NZC2 230 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms