RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 PRSS44E7EML9 344 aa19.23■□□□□ 0.67
PCDH1-204ENST00000503492 DUSP1P28562 367 aa19.23■□□□□ 0.67
PCDH1-204ENST00000503492 UBE2NP61088 152 aaKnown RBP19.23■□□□□ 0.67
PCDH1-204ENST00000503492 GNG3P63215 75 aa19.23■□□□□ 0.67
PCDH1-204ENST00000503492 RAB32Q13637 225 aa19.23■□□□□ 0.67
PCDH1-204ENST00000503492 MPV17LQ2QL34 196 aa19.23■□□□□ 0.67
PCDH1-204ENST00000503492 PRSS54Q6PEW0 395 aa19.23■□□□□ 0.67
PCDH1-204ENST00000503492 SDHAF2Q9NX18 166 aa19.23■□□□□ 0.67
PCDH1-204ENST00000503492 MFSD2BA6NFX1 497 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 PRR33A8MZF0 331 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 PRKACAP17612 351 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 IDH3GP51553 393 aaPredicted RBP19.22■□□□□ 0.67
PCDH1-204ENST00000503492 GABRA6Q16445 453 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 IGSF11Q5DX21 431 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 FAM74A1Q5RGS3 127 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 PDZD9Q8IXQ8 264 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 MOB3AQ96BX8 217 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 PIK3IP1Q96FE7 263 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 ARPC5LQ9BPX5 153 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 GSKIPQ9P0R6 139 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 KCNMB2Q9Y691 235 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 C3orf80F5H4A9 247 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 SMPD2O60906 423 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 NAPSAO96009 420 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 TSC22D1Q15714 1073 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 Q6ZT83 130 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 C5orf24Q7Z6I8 188 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 ZNF573Q86YE8 665 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 CNEP1R1Q8N9A8 125 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 C9orf106Q8NAJ2 232 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 CCDC120Q96HB5 630 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 NAA60Q9H7X0 242 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 RASL12Q9NYN1 266 aa19.22■□□□□ 0.67
PCDH1-204ENST00000503492 ZNF891A8MT65 544 aaPredicted RBP19.21■□□□□ 0.67
PCDH1-204ENST00000503492 F5H0A9 414 aaPredicted RBP19.21■□□□□ 0.67
PCDH1-204ENST00000503492 CEACAM4O75871 244 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 AADACP22760 399 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 GLP1RP43220 463 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 KIR2DL2P43627 348 aaPredicted RBP19.21■□□□□ 0.67
PCDH1-204ENST00000503492 ESPL1Q14674 2120 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 ABCA11PQ4W5N1 156 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 FBXW12Q6X9E4 464 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 CCDC28AQ8IWP9 274 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 RTN4IP1Q8WWV3 396 aaPredicted RBP19.21■□□□□ 0.67
PCDH1-204ENST00000503492 Q9N2K0 584 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 LHX6Q9UPM6 363 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 HSPB6O14558 160 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 ERVS71-1P61550 626 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 SP6Q3SY56 376 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 PHLDA2Q53GA4 152 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 UNQ6126/PRO20091Q6UXV3 157 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 Q6ZS49 121 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 SLC25A32Q9H2D1 315 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 OR51I2Q9H344 312 aa19.21■□□□□ 0.67
PCDH1-204ENST00000503492 MSGN1A6NI15 193 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 TPD52L2O43399 206 aaKnown RBP19.2■□□□□ 0.66
PCDH1-204ENST00000503492 UCP3P55916 312 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 PPP1CBP62140 327 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 IL24Q13007 206 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 VWA1Q6PCB0 445 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 CCDC36Q8IYA8 594 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 MRPL24Q96A35 216 aaKnown RBP19.2■□□□□ 0.66
PCDH1-204ENST00000503492 SARAFQ96BY9 339 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 GALNT14Q96FL9 552 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 OR2J1Q9GZK6 312 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 CDH20Q9HBT6 801 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 SLC2A9Q9NRM0 540 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 TEX46H3BTG2 121 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 J3QW42 95 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 SHOXO15266 292 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 OR5AC1P0C628 307 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 TMEM187Q14656 261 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 IAH1Q2TAA2 248 aaPredicted RBP19.2■□□□□ 0.66
PCDH1-204ENST00000503492 GGNBP1Q5YKI7 109 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 PLSCR2Q9NRY7 297 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 KCNIP3Q9Y2W7 256 aa19.2■□□□□ 0.66
PCDH1-204ENST00000503492 RHBDL1O75783 438 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 MRPL49Q13405 166 aaKnown RBP19.19■□□□□ 0.66
PCDH1-204ENST00000503492 SRSF7Q16629 238 aaKnown RBP eCLIP19.19■□□□□ 0.66
PCDH1-204ENST00000503492 C17orf78Q8N4C9 275 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 OR11L1Q8NGX0 322 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 TAAR6Q96RI8 345 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 PKIBQ9C010 78 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 PFDN2Q9UHV9 154 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 PPYP01298 95 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 NOVA1P51513 510 aaKnown RBP19.19■□□□□ 0.66
PCDH1-204ENST00000503492 SLC38A6Q8IZM9 456 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 OR5T2Q8NGG2 359 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 NEK7Q8TDX7 302 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 WNT2BQ93097 391 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 PHYHIPLQ96FC7 376 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 RSRP1Q9BUV0 290 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 PLK3Q9H4B4 646 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 MEMO1Q9Y316 297 aa19.19■□□□□ 0.66
PCDH1-204ENST00000503492 SCTP09683 121 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 CEACAM1P13688 526 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 S100A10P60903 97 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 HERV-K104P61576 105 aa19.18■□□□□ 0.66
PCDH1-204ENST00000503492 INO80CQ6PI98 192 aaPredicted RBP19.18■□□□□ 0.66
PCDH1-204ENST00000503492 SUMF2Q8NBJ7 301 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms