RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TNFSF13O75888 250 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 HIST1H3AP68431 136 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 MPV17LQ2QL34 196 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 TSPO2Q5TGU0 170 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 RTL6Q6ICC9 239 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 LRP11Q86VZ4 500 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 IL22RA1Q8N6P7 574 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 OR5C1Q8NGR4 320 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 MS4A10Q96PG2 267 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 PCGF1Q9BSM1 259 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 TBL1XR1Q9BZK7 514 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 PLEKHF2Q9H8W4 249 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 PRR19A6NJB7 356 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 SERPINE3A8MV23 424 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 GALR1P47211 349 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 SGCBQ16585 318 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.25□□□□□ -0.61
PRPF4-201ENST00000374198 TMEM241Q24JQ0 296 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 ABCA11PQ4W5N1 156 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 AGBL4Q5VU57 503 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 LEMD1Q68G75 181 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 ETFRF1Q6IPR1 90 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 OGFOD3Q6PK18 319 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 RNF133Q8WVZ7 376 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 ZCCHC14Q8WYQ9 949 aaKnown RBP11.25□□□□□ -0.61
PRPF4-201ENST00000374198 EXTL1Q92935 676 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 TOMM40LQ969M1 308 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 SDSLQ96GA7 329 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 GPER1Q99527 375 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 LIME1Q9H400 295 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 LANCL2Q9NS86 450 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 FOXJ2Q9P0K8 574 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 THAP10Q9P2Z0 257 aaPredicted RBP11.25□□□□□ -0.61
PRPF4-201ENST00000374198 TRAV36DV7A0A075B6V5 113 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 EDDM13A0A1B0GTR0 161 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 GLI4P10075 376 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 PRSS8Q16651 343 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 H1FOOQ8IZA3 346 aaPredicted RBP11.25□□□□□ -0.61
PRPF4-201ENST00000374198 MSI2Q96DH6 328 aaKnown RBP11.25□□□□□ -0.61
PRPF4-201ENST00000374198 OR5B12Q96R08 314 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 ADOQ96SZ5 270 aa11.25□□□□□ -0.61
PRPF4-201ENST00000374198 AURKAIP1Q9NWT8 199 aaPredicted RBP11.25□□□□□ -0.61
PRPF4-201ENST00000374198 C20orf202A1L168 122 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 PROB1E7EW31 1015 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 H0YGG7 62 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 SCDO00767 359 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 ZNF728P0DKX0 622 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 CHRNB4P30926 498 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
PRPF4-201ENST00000374198 ARF3P61204 181 aaPredicted RBP11.24□□□□□ -0.61
PRPF4-201ENST00000374198 SELENOTP62341 195 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 MESP2Q0VG99 397 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 PRDX4Q13162 271 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 ADIRFQ15847 76 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 KLHL24Q6TFL4 600 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 CPEB2Q7Z5Q1 589 aaKnown RBP11.24□□□□□ -0.61
PRPF4-201ENST00000374198 TMEM252Q8N6L7 170 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 FLVCR1-AS1Q8TAF5 88 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 OR51E1Q8TCB6 317 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 P2RX4Q99571 388 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 Q9N2K0 584 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 GLRX2Q9NS18 164 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 FREM3P0C091 2139 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 TRPM6Q9BX84 2022 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 ONECUT2O95948 504 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 DYNLT3P51808 116 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 DCAF7P61962 342 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 KCNMB1Q16558 191 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 FIGLAQ6QHK4 219 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 ZNF248Q8NDW4 579 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 C16orf52Q8NHV5 167 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 RERGQ96A58 199 aaPredicted RBP11.24□□□□□ -0.61
PRPF4-201ENST00000374198 ZPBPQ9BS86 351 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 SERINC1Q9NRX5 453 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 B3GAT1Q9P2W7 334 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 B3GALT1Q9Y5Z6 326 aa11.24□□□□□ -0.61
PRPF4-201ENST00000374198 TNFSF14O43557 240 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 PRKNO60260 465 aaPredicted RBP11.23□□□□□ -0.61
PRPF4-201ENST00000374198 ZNF41P51814 821 aaPredicted RBP11.23□□□□□ -0.61
PRPF4-201ENST00000374198 IL24Q13007 206 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 CLEC12BQ2HXU8 276 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 TDRG1Q3Y452 100 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 CENPVQ7Z7K6 275 aaPredicted RBP11.23□□□□□ -0.61
PRPF4-201ENST00000374198 METTL27Q8N6F8 245 aaPredicted RBP11.23□□□□□ -0.61
PRPF4-201ENST00000374198 AGBL5Q8NDL9 886 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 ZNF665Q9H7R5 613 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 LYRM2Q9NU23 88 aaPredicted RBP11.23□□□□□ -0.61
PRPF4-201ENST00000374198 OR6C3Q9NZP0 311 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 NAT8Q9UHE5 227 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 PRSS50Q9UI38 385 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 MCTS1Q9ULC4 181 aaKnown RBP11.23□□□□□ -0.61
PRPF4-201ENST00000374198 HEBP2Q9Y5Z4 205 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 PRRT4C9JH25 899 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 H7BYZ3 331 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 TMEM225BP0DP42 221 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 HNF1AP20823 631 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 RANP62826 216 aaKnown RBP11.23□□□□□ -0.61
PRPF4-201ENST00000374198 ZXDAP98168 799 aa11.23□□□□□ -0.61
PRPF4-201ENST00000374198 ENDOGQ14249 297 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms