RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 PIPOXQ9P0Z9 390 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 KIAA0100Q14667 2235 aaKnown RBP12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 DDX60LQ5H9U9 1706 aaKnown RBP12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 LOC105371242A0A075B767 164 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 A0A1W2PS18 150 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 POM121CA8CG34 1229 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 CT62P0C5K7 136 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 TIMP4Q99727 224 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 FOXJ2Q9P0K8 574 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 ZDHHC8Q9ULC8 765 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 C21orf58P58505 322 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 H3F3CQ6NXT2 135 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 SCGB1D4Q6XE38 83 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 TMEM123Q8N131 208 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 OR52I2Q8NH67 350 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 FAM168AQ92567 244 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 POM121Q96HA1 1249 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 PARP12Q9H0J9 701 aaKnown RBP12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 FAM24AA6NFZ4 105 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 NRN1LQ496H8 165 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 MARCH1Q8TCQ1 289 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 ABHD17AQ96GS6 310 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 SLC7A10Q9NS82 523 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 BET1LQ9NYM9 111 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 SLC45A2Q9UMX9 530 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 GAPDHP04406 335 aaKnown RBP12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 APELAP0DMC3 54 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 SPCS2Q15005 226 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 FAM209AQ5JX71 171 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 OR8I2Q8N0Y5 310 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 ALG14Q96F25 216 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 OR2J1Q9GZK6 312 aa12.63□□□□□ -0.39
ZC3H4-201ENST00000253048 SS18L1O75177 396 aaPredicted RBP12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 BCL3P20749 454 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 TAGLNQ01995 201 aaKnown RBP12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 DDB2Q92466 427 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 HARBI1Q96MB7 349 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 ABHD14AQ9BUJ0 271 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 SLC52A3Q9NQ40 469 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 IGLV3-16A0A075B6K0 115 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 LOC101059948A0A1B0GTJ6 334 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 NHLH1Q02575 133 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 NHLH2Q02577 135 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 LY6DQ14210 128 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 ALKAL2Q6UX46 152 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 REC114Q7Z4M0 266 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 DRAXINQ8NBI3 349 aaPredicted RBP12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 TNRC6CQ9HCJ0 1690 aaKnown RBP12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 NME2P1O60361 137 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 CSRP1P21291 193 aaKnown RBP12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 HAGHQ16775 308 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 FAM106AQ4KMX7 169 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 NECAP1Q8NC96 275 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 RPUSD4Q96CM3 377 aaKnown RBP12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 PLEKHA2Q9HB19 425 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 TCRBV16S1A1N1A0A5B0 115 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 HMX2A2RU54 273 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 SIX6O95475 246 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 ADIPOQQ15848 244 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 EIF4E3Q8N5X7 224 aaKnown RBP12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 OR52M1Q8NGK5 317 aa12.62□□□□□ -0.39
ZC3H4-201ENST00000253048 ZNF239Q16600 458 aaKnown RBP12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 PCSK4Q6UW60 755 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 DERL3Q96Q80 235 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 CCL13Q99616 98 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 FAAP24Q9BTP7 215 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 CABLES2Q9BTV7 478 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 ADGRL4Q9HBW9 690 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 UQCC1Q9NVA1 299 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 JTBO76095 146 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 ACAA2P42765 397 aaKnown RBP12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 HLXQ14774 488 aaPredicted RBP12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 ZNF701M0R085 212 aaPredicted RBP12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 MGPP08493 103 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 COL19A1Q14993 1142 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 R3HDM4Q96D70 268 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 UCN2Q96RP3 112 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 TMEM38BQ9NVV0 291 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 METRNQ9UJH8 293 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 WIPI2Q9Y4P8 454 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 PDCD6O75340 191 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 ZNF883P0CG24 379 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 GALR1P47211 349 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 PCOLCEQ15113 449 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 ZNF547Q8IVP9 402 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 TMEM105Q8N8V8 129 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 AMER3Q8N944 861 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 ZNF519Q8TB69 540 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 NDUFA2O43678 99 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 UBE2MP61081 183 aaKnown RBP12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 ZIC1Q15915 447 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 GABRA6Q16445 453 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 SLC25A45Q8N413 288 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 RNF2Q99496 336 aa12.61□□□□□ -0.39
ZC3H4-201ENST00000253048 H3BP45 60 aa12.6□□□□□ -0.39
ZC3H4-201ENST00000253048 WNT9BO14905 357 aa12.6□□□□□ -0.39
ZC3H4-201ENST00000253048 NUDT3O95989 172 aa12.6□□□□□ -0.39
ZC3H4-201ENST00000253048 RPL12P30050 165 aaKnown RBP12.6□□□□□ -0.39
ZC3H4-201ENST00000253048 C19orf54Q5BKX5 351 aa12.6□□□□□ -0.39
ZC3H4-201ENST00000253048 ETV3LQ6ZN32 361 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms