RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 ZNF826PQ6ZT77 177 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 BATF2Q8N1L9 274 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 MUC15Q8N387 334 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 TOMM5Q8N4H5 51 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 MINDY2Q8NBR6 621 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 ST8SIA4Q92187 359 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 GCDHQ92947 438 aaPredicted RBP9.95□□□□□ -0.82
CLN6-223ENST00000637823 COX4I2Q96KJ9 171 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 EGLN1Q9GZT9 426 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 IFT22Q9H7X7 185 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 HES4Q9HCC6 221 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 TAS2R8Q9NYW2 309 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 KLK11Q9UBX7 282 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 ELF5Q9UKW6 265 aaPredicted RBP9.95□□□□□ -0.82
CLN6-223ENST00000637823 TBC1D24Q9ULP9 559 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 KCNK7Q9Y2U2 307 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 TANC2Q9HCD6 1990 aa9.95□□□□□ -0.82
CLN6-223ENST00000637823 MYO18BQ8IUG5 2567 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 PKDREJQ9NTG1 2253 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 LINC00854A0A1B0GVQ3 168 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 hCG_1807616A0A1W2PRN6 198 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 ANKRD20A5PA0PJZ0 165 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 SH2D1BO14796 132 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 PDCD6O75340 191 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 OR7C1O76099 320 aaPredicted RBP9.94□□□□□ -0.82
CLN6-223ENST00000637823 GLAP06280 429 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 CBX5P45973 191 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 GNG2P59768 71 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 ACTBP60709 375 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 ACTG1P63261 375 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 DYRK1AQ13627 763 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 ARFRP1Q13795 201 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 TESK1Q15569 626 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 SPIN3Q5JUX0 258 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 C6orf201Q7Z4U5 140 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 MOGAT3Q86VF5 341 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 CHPT1Q8WUD6 406 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 LRRC29Q8WV35 223 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 DEDD2Q8WXF8 326 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 FBXW5Q969U6 566 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 OCSTAMPQ9BR26 566 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 C7orf50Q9BRJ6 194 aaKnown RBP9.94□□□□□ -0.82
CLN6-223ENST00000637823 SPACA1Q9HBV2 294 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 GCM1Q9NP62 436 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 DYNLRB1Q9NP97 96 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 DECR2Q9NUI1 292 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 FAIMQ9NVQ4 179 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 GLS2Q9UI32 602 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 ZNF107Q9UII5 783 aaPredicted RBP9.94□□□□□ -0.82
CLN6-223ENST00000637823 PLEKHA6Q9Y2H5 1048 aa9.94□□□□□ -0.82
CLN6-223ENST00000637823 UBR5O95071 2799 aaPredicted RBP9.93□□□□□ -0.82
CLN6-223ENST00000637823 DOPEY1Q5JWR5 2465 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 A6NNC1 897 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 CENPXA8MT69 81 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 VGLL3A8MV65 326 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 HS3ST1O14792 307 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 DEGS1O15121 323 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 LYRM1O43325 122 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 SSX5O60225 188 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 PTTG1O95997 202 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 LHBP01229 141 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 CSF1P09603 554 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 GLRA1P23415 457 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 SNU13P55769 128 aaKnown RBP9.93□□□□□ -0.82
CLN6-223ENST00000637823 SNRPD2P62316 118 aaKnown RBP9.93□□□□□ -0.82
CLN6-223ENST00000637823 IKZF1Q13422 519 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 KLF9Q13886 244 aaPredicted RBP9.93□□□□□ -0.82
CLN6-223ENST00000637823 ZNF146Q15072 292 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 TRIM16LQ309B1 348 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 SMIM21Q3B7S5 101 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 SPRNQ5BIV9 151 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 NKAPLQ5M9Q1 402 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 ATAD3CQ5T2N8 411 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 OLFML2AQ68BL7 652 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 ACP7Q6ZNF0 438 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 TRAPPC6BQ86SZ2 158 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 FAM90A1Q86YD7 464 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 OR11L1Q8NGX0 322 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 Q8TCH9 128 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 SPOCK3Q9BQ16 436 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 FAAP24Q9BTP7 215 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 C11orf54Q9H0W9 315 aaPredicted RBP9.93□□□□□ -0.82
CLN6-223ENST00000637823 SEBOXQ9HB31 216 aaPredicted RBP9.93□□□□□ -0.82
CLN6-223ENST00000637823 RCC2Q9P258 522 aaKnown RBP9.93□□□□□ -0.82
CLN6-223ENST00000637823 RNF7Q9UBF6 113 aa9.93□□□□□ -0.82
CLN6-223ENST00000637823 SETXQ7Z333 2677 aaKnown RBP9.93□□□□□ -0.82
CLN6-223ENST00000637823 RAI1Q7Z5J4 1906 aaPredicted RBP9.92□□□□□ -0.82
CLN6-223ENST00000637823 MEIS3P1A6NDR6 274 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 SRRM5B3KS81 715 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 MCRIP1C9JLW8 97 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 PYCARD-AS1I3L0S3 204 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 IFNL4K9M1U5 179 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 WNT9BO14905 357 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 KNG1P01042 644 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 NAT1P18440 290 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 DUSP1P28562 367 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 RCVRNP35243 200 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 CCL8P80075 99 aa9.92□□□□□ -0.82
CLN6-223ENST00000637823 MRPS15P82914 257 aaKnown RBP9.92□□□□□ -0.82
CLN6-223ENST00000637823 SRSF1Q07955 248 aaKnown RBP eCLIP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms