RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 TECRQ9NZ01 308 aaKnown RBP1.43□□□□□ -2.18
TRAV1-1-201ENST00000542354 OR6C3Q9NZP0 311 aa1.43□□□□□ -2.18
TRAV1-1-201ENST00000542354 ZNF391Q9UJN7 358 aa1.43□□□□□ -2.18
TRAV1-1-201ENST00000542354 TMED7Q9Y3B3 224 aa1.43□□□□□ -2.18
TRAV1-1-201ENST00000542354 NOP16Q9Y3C1 178 aaKnown RBP1.43□□□□□ -2.18
TRAV1-1-201ENST00000542354 MUC17Q685J3 4493 aa1.43□□□□□ -2.18
TRAV1-1-201ENST00000542354 LOC102725191A0A1B0GVB3 256 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 A0A1B0GWJ7 208 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 TMEM72A0PK05 275 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 C17orf98A8MV24 154 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 M0R2T5 61 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 CST8O60676 142 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 ZNF324O75467 553 aaPredicted RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 OR2A4O95047 310 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 PSMG1O95456 288 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 YEATS4O95619 227 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 HAND1O96004 215 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 IGHV3-11P01762 117 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 MMP7P09237 267 aaPredicted RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 CLUP10909 449 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 PRPS2P11908 318 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 SELLP14151 372 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 C21orf33P30042 268 aaPredicted RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 GRK5P34947 590 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 GSTM5P46439 218 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 POLR2HP52434 150 aaKnown RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 ACTA2P62736 377 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 RPL31P62899 125 aaKnown RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 ACTG2P63267 376 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 ACTC1P68032 377 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 ACTA1P68133 377 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 ELF3P78545 371 aaPredicted RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 MT1HP80294 61 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 CDKL1Q00532 357 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 HNF4GQ14541 408 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 CLINT1Q14677 625 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 PDK4Q16654 411 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 DGUOKQ16854 277 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 MOGAT2Q3SYC2 334 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM76BQ5HYJ3 339 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 BEND6Q5SZJ8 279 aaPredicted RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 RNASEH2BQ5TBB1 312 aaKnown RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 GRHL2Q6ISB3 625 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 TMEM88Q6PEY1 159 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 CCDC137Q6PK04 289 aaKnown RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 TMEM107Q6UX40 140 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 PPP1R21Q6ZMI0 780 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 SLC16A12Q6ZSM3 486 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 TMPRSS11FQ6ZWK6 438 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 SSX7Q7RTT5 188 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM122BQ7Z309 247 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 TGIF2LXQ8IUE1 241 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 SLC38A6Q8IZM9 456 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 OR2L13Q8N349 312 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 LRRC18Q8N456 261 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 COX18Q8N8Q8 333 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 CDRT4Q8N9R6 151 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 POC5Q8NA72 575 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 OR5T2Q8NGG2 359 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 OR52N4Q8NGI2 321 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 OR5L1Q8NGL2 311 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 OR2T11Q8NH01 316 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 RHEBL1Q8TAI7 183 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 GLMPQ8WWB7 406 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 EXOSC8Q96B26 276 aaKnown RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 TM4SF18Q96CE8 201 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 ELP4Q96EB1 424 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 SDSLQ96GA7 329 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 SERPINB12Q96P63 405 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 SERPINI1Q99574 410 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 RASL11BQ9BPW5 248 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 ABHD14AQ9BUJ0 271 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 EMC6Q9BV81 110 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 ZNF436Q9C0F3 470 aaPredicted RBP1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 SLC22A4Q9H015 551 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 RNPEPL1Q9HAU8 725 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 LZTFL1Q9NQ48 299 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 EQTNQ9NQ60 294 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 SLC35C2Q9NQQ7 365 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 PCDHB16Q9NRJ7 776 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 C19orf12Q9NSK7 152 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 TMEM38BQ9NVV0 291 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 GIN1Q9NXP7 522 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 TAS2R13Q9NYV9 303 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 STARD10Q9Y365 291 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 NDUFAF1Q9Y375 327 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 LINC00588Q9Y4M8 146 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 MDN1Q9NU22 5596 aa1.42□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM90A18PA6NE21 464 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM90A16PA6NEW6 464 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM90A20PA6NIJ5 464 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM90A9PA6NNJ1 464 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM90A12PA8MX19 464 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM90A5PA8MXJ8 464 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 IQCF6A8MYZ5 107 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 OOSP1A8MZH6 123 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM220BPB1ANY3 271 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 RAB27BO00194 218 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 MPZL2O60487 215 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FMO6PO60774 539 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms