RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 SLCO1B3Q9NPD5 702 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 FGF21Q9NSA1 209 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 ACSS1Q9NUB1 689 aaPredicted RBP1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 FGFR1OP2Q9NVK5 253 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 LYARQ9NX58 379 aaKnown RBP1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 C1RLQ9NZP8 487 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 KIAA1456Q9P272 454 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 SEC14L4Q9UDX3 406 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 ZDHHC2Q9UIJ5 367 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 DKKL1Q9UK85 242 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 NXT1Q9UKK6 140 aaKnown RBP1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 A4GNTQ9UNA3 340 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 GPR132Q9UNW8 380 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 SLC22A13Q9Y226 551 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 MEMO1Q9Y316 297 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 RNF11Q9Y3C5 154 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 CSDC2Q9Y534 153 aaKnown RBP1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 NUBP2Q9Y5Y2 271 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 CELSR1Q9NYQ6 3014 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 ICE1Q9Y2F5 2266 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 UTP20O75691 2785 aaKnown RBP1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 PLCE1Q9P212 2302 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 APCP25054 2843 aa1.56□□□□□ -2.16
CBX3P4-201ENST00000538909 ESPL1Q14674 2120 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ABCA4P78363 2273 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 DOPEY2Q9Y3R5 2298 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 LRBAP50851 2863 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PQLC2LA1A4F0 135 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PRSS37A4D1T9 235 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TMEM8BA6NDV4 472 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TRABD2BA6NFA1 517 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CCT8L1PA6NM43 557 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NPIPB5A8MRT5 1133 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 EVPLLA8MZ36 301 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FAM25AB3EWG3 89 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FAM25CB3EWG5 89 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FAM25GB3EWG6 89 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 C21orf140B9A014 251 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 DISC1C4P0D8 188 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 C9J4A7 227 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 USP17L23D6RBM5 183 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 LOC110117498-PIK3R3F6TDL0 507 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 G3V2T6 193 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 RNASEK-C17orf49H0YIS7 233 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 H3BNH8 94 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SGK494L7N484 410 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FXYD1O00168 92 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MANBAO00462 879 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CXCR6O00574 342 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 BHLHE40O14503 412 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 AZIN1O14977 448 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ACOX3O15254 700 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MAGEB4O15481 346 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 RGS16O15492 202 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 EMC8O43402 210 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TGOLN2O43493 480 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 AIREO43918 545 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SNX3O60493 162 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TSPAN2O60636 221 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF354AO60765 605 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SLC19A2O60779 497 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 RAMP3O60896 148 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NDUFS7O75251 213 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SPAG7O75391 227 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 EEDO75530 441 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PRKRAO75569 313 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 STK17BO94768 372 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 BRI3O95415 125 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FADS2O95864 444 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 WDPCPO95876 746 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ADAP00813 363 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 IFNA10P01566 189 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 IFNA4P05014 189 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ATP1B1P05026 303 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SERPINE1P05121 402 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CDK1P06493 297 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 HIST1H2AGP0C0S8 130 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CT62P0C5K7 136 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SLC35E2P0CK97 266 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SPP1P10451 314 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TFPIP10646 304 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MYL2P10916 166 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 LIFP15018 202 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CPN1P15169 458 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CD36P16671 472 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF182P17025 639 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 HLA-GP17693 338 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 IL1RNP18510 177 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SDC1P18827 310 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 HIST1H2ADP20671 130 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 HIST1H1TP22492 207 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ATP5A1P25705 553 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ELAVL4P26378 380 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 DCKP27707 260 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 HTR2AP28223 471 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 HTR2CP28335 458 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 EPHA2P29317 976 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SHC1P29353 583 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 S100GP29377 79 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CALCRP30988 508 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms