RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 ACOT8O14734 319 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 CDIPTO14735 213 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 FCN3O75636 299 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 FAM107AO95990 144 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 T-ENOLP0DO92 83 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 OSMP13725 252 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 POU1F1P28069 291 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 TGM4P49221 684 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 LRRC10Q5BKY1 277 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 FAM76BQ5HYJ3 339 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 OLFML2AQ68BL7 652 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 PLBD1Q6P4A8 553 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 METAP1DQ6UB28 335 aaPredicted RBP16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 LDLRAD3Q86YD5 345 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 DPAGT1Q9H3H5 408 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 HAO2Q9NYQ3 351 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 TAS2R1Q9NYW7 299 aa16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 PDP1Q9P0J1 537 aaPredicted RBP16.47■□□□□ 0.23
UBE2D3-220ENST00000505307 MEGF8Q7Z7M0 2845 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 CLPSL1A2RUU4 121 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 ACOD1A6NK06 481 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 KCNAB3O43448 404 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 ANXA8P13928 327 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 CDK5Q00535 292 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 GUCA2AQ02747 115 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 OCLNQ16625 522 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 WFDC12Q8WWY7 111 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 OR5P3Q8WZ94 311 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 MED30Q96HR3 178 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 HIST1H2AAQ96QV6 131 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 YY1AP1Q9H869 796 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 DNAJB11Q9UBS4 358 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 FAM96BQ9Y3D0 163 aa16.46■□□□□ 0.23
UBE2D3-220ENST00000505307 NKX6-3A6NJ46 265 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 SELENOFO60613 162 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 E2F6O75461 281 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 IER3P46695 156 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 PSMA6P60900 246 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 PRDX4Q13162 271 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 STUMQ69YW2 141 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 VMO1Q7Z5L0 202 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 CPOQ8IVL8 374 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 PAPD5Q8NDF8 572 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 C8orf46Q8TAG6 207 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 CANT1Q8WVQ1 401 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 LRTOMTQ8WZ04 291 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 RAB3IPQ96QF0 476 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 DCTN5Q9BTE1 182 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 THTPAQ9BU02 230 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 ONECUT1Q9UBC0 465 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 TRRAPQ9Y4A5 3859 aa16.45■□□□□ 0.22
UBE2D3-220ENST00000505307 A0A0U1RQK1 487 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 ZNF850A8MQ14 1090 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 EEF1B2P24534 225 aaKnown RBP16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 ACKR3P25106 362 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 RELBQ01201 579 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 KCTD18Q6PI47 426 aaPredicted RBP16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 DEGS2Q6QHC5 323 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 GDPGP1Q6ZNW5 385 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 C1orf122Q6ZSJ8 110 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 KRT74Q7RTS7 529 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 ZDHHC23Q8IYP9 409 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 FAM216BQ8N7L0 139 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 PIGCQ92535 297 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 RNF170Q96K19 258 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 CLPTM1LQ96KA5 538 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 PKP2Q99959 881 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 PPP1R3EQ9H7J1 279 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 LAMP5Q9UJQ1 280 aa16.44■□□□□ 0.22
UBE2D3-220ENST00000505307 GPR137BO60478 399 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 FBP1P09467 338 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 ATP6V1B1P15313 513 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 ALOX5APP20292 161 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 MAP2K3P46734 347 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 RPS7P62081 194 aaKnown RBP16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 IKZF1Q13422 519 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 ZNF788Q6ZQV5 615 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 KCTD8Q6ZWB6 473 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 KRT77Q7Z794 578 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 TMEM179BQ7Z7N9 219 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 FAM81AQ8TBF8 368 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 DNAJC9Q8WXX5 260 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 RPL3LQ92901 407 aaKnown RBP16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 SEH1LQ96EE3 360 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 YIPF3Q9GZM5 350 aa16.43■□□□□ 0.22
UBE2D3-220ENST00000505307 A0A0U1RQV5 110 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 ZNF816-ZNF321PA0A0X1KG74 233 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 A0A1B0GW55 424 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 BTBD17A6NE02 478 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 IGHV4-59P01825 116 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 DUX4L2P0CJ85 424 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 DUX4L3P0CJ86 424 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 DUX4L4P0CJ87 422 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 DUX4L5P0CJ88 424 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 DUX4L6P0CJ89 424 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 DUX4L7P0CJ90 424 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 AMY2BP19961 511 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 DCTDP32321 178 aa16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 DUX4L9Q6RFH8 374 aaPredicted RBP16.42■□□□□ 0.22
UBE2D3-220ENST00000505307 PIP4P2Q8N4L2 257 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms