RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 ZP3P21754 424 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 CCNE1P24864 410 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 HSD11B1P28845 292 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 HRH1P35367 487 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 COILP38432 576 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 RPL34P49207 117 aaKnown RBP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 AP1S2P56377 157 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 NUP107P57740 925 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF121P58317 390 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 POLR2GP62487 172 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 SEMG2Q02383 582 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 TWF1Q12792 350 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DYNC1I2Q13409 638 aaKnown RBP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 SLC39A6Q13433 755 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 GPNMBQ14956 572 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 TMED2Q15363 201 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR7A5Q15622 319 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 POU2AF1Q16633 256 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 NRF1Q16656 503 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 PDZD11Q5EBL8 140 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 GPRC6AQ5T6X5 926 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 CST9Q5W186 159 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DUX4L9Q6RFH8 374 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DRAM2Q6UX65 266 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 NPSR1Q6W5P4 371 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DNM1P46Q6ZS02 220 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 PPP1R27Q86WC6 154 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 HORMAD1Q86X24 394 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 C9orf40Q8IXQ3 194 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 MCOLN2Q8IZK6 566 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 Q8N402 240 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 STPG2Q8N412 459 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DEFB123Q8N688 67 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 LRRC52Q8N7C0 313 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 WDR31Q8NA23 367 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR5D18Q8NGL1 313 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR8U1Q8NH10 309 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 ACTL9Q8TC94 416 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DYNC2LI1Q8TCX1 351 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 RNASEH2CQ8TDP1 164 aaKnown RBP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 NDRG1Q92597 394 aaKnown RBP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 FGF14Q92915 247 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 SGTBQ96EQ0 304 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 WDR34Q96EX3 536 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 NOL4LQ96MY1 436 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF681Q96N22 645 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 TAAR1Q96RJ0 339 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 ATOH8Q96SQ7 321 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 SH3GL3Q99963 347 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 APOL4Q9BPW4 351 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 HES7Q9BYE0 225 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 CHIAQ9BZP6 476 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 ACTR6Q9GZN1 396 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 ISYNA1Q9NPH2 558 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 NLE1Q9NVX2 485 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 BABAM2Q9NXR7 383 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 SLC25A37Q9NYZ2 338 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 KCNIP1Q9NZI2 227 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DUX4Q9UBX2 424 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 Q9UF83 564 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF337Q9Y3M9 751 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 LRRC42Q9Y546 428 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 MRC1P22897 1456 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 MROH7Q68CQ1 1323 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 PCDH11XQ9BZA7 1347 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 MAPK8IP3Q9UPT6 1336 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 PIEZO1Q92508 2521 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF609O15014 1411 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 IGHV1OR21-1A0A087WYE8 117 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 A0A0B4J2E0 115 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 A0A1B0GX12 115 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR5K4A6NMS3 321 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 C9J4A7 227 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 ANKRD63C9JTQ0 380 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 H3BQV1 296 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 ACOX3O15254 700 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 MBTPS2O43462 519 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 RAD51CO43502 376 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 HPGDSO60760 199 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 UTS2O95399 124 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 GCGP01275 180 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 ARG1P05089 322 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 HPNP05981 417 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR5AL1P0C617 328 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 C8orf88P0DMB2 117 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 CAPN2P17655 700 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 PRPS1L1P21108 318 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 IGHV1-2P23083 117 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 ADORA2BP29275 332 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 GNRHRP30968 328 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 SHMT2P34897 504 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 RPA3P35244 121 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 ARL2P36404 184 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 GPX4P36969 197 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 IDH2P48735 452 aaKnown RBP2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 SERPINB8P50452 374 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 HCCSP53701 268 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 SUB1P53999 127 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 ARPC4P59998 168 aa2.87□□□□□ -1.95
HMGB1P15-201ENST00000453854 LMO4P61968 165 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms