RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 FAM57BQ71RH2 274 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 SLC36A1Q7Z2H8 476 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 C11orf53Q8IXP5 236 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 TIGD4Q8IY51 512 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 GALNT4Q8N4A0 578 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 ZNF454Q8N9F8 522 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 TBC1D15Q8TC07 691 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 LRRC29Q8WV35 223 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 SSMEM1Q8WWF3 244 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 OTULINQ96BN8 352 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 CCT8L2Q96SF2 557 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 MICU1Q9BPX6 476 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 RASSF4Q9H2L5 321 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 CNTD2Q9H8S5 307 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 RPUSD1Q9UJJ7 312 aaKnown RBP16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 MPC1Q9Y5U8 109 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 KPTNQ9Y664 436 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 IGHV1-69DA0A0B4J2H0 117 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 FAM183AA6NL82 134 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 CST1P01037 141 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 IGHV1-69P01742 117 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 HMGN1P05114 100 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 MELTFP08582 738 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 H2BFMP0C1H6 154 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 RUSC1-AS1Q66K80 236 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 WDR82Q6UXN9 313 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 PGAM5Q96HS1 289 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 CHID1Q9BWS9 393 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 PAPOLGQ9BWT3 736 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 TLNRD1Q9H1K6 362 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 MED20Q9H944 212 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 ZNF391Q9UJN7 358 aa16.51■□□□□ 0.23
UBE2D3-220ENST00000505307 PRR23D1E9PI22 279 aaPredicted RBP16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 NDUFA7O95182 113 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 KNG1P01042 644 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 LYNP07948 512 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 PRR23D2P0DMB1 279 aaPredicted RBP16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 ARF6P62330 175 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 CDONQ4KMG0 1287 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 FIP1L1Q6UN15 594 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 WDR86Q86TI4 376 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 IQCF1Q8N6M8 205 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 OTOSQ8NHW6 89 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 ST8SIA4Q92187 359 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 TAF15Q92804 592 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 ITFG2Q969R8 447 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 RTL8AQ9BWD3 113 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 DNTTIP1Q9H147 329 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 C1orf21Q9H246 121 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 OR51V1Q9H2C8 321 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 NIPAL2Q9H841 368 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 DNAJC27Q9NZQ0 273 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 RHBDD3Q9Y3P4 386 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 PKD1L1Q8TDX9 2849 aa16.5■□□□□ 0.23
UBE2D3-220ENST00000505307 IGHV3OR15-7A0A075B7D8 119 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 A0A1B0GVI7 797 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 TMEM210A6NLX4 147 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 GNGT2O14610 69 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 PRODHO43272 600 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 RAG2P55895 527 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 KLHL12Q53G59 568 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 ATPAF1Q5TC12 328 aaPredicted RBP16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 TREML4Q6UXN2 200 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 CMTM4Q8IZR5 234 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 LY6G5BQ8NDX9 201 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 OR10Z1Q8NGY1 313 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 DYRK2Q92630 601 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 LHX4Q969G2 390 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 ITPKCQ96DU7 683 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 TEX12Q9BXU0 123 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 CHIAQ9BZP6 476 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 ZNF556Q9HAH1 456 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 ZNF319Q9P2F9 582 aa16.49■□□□□ 0.23
UBE2D3-220ENST00000505307 AQP12BA6NM10 295 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 NDUFB3O43676 98 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 CST4P01036 141 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 OMGP23515 440 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 CSNK2BP67870 215 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 POU4F2Q12837 409 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 GINS1Q14691 196 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 GFOD2Q3B7J2 385 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 WDR38Q5JTN6 314 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 SLC35D3Q5M8T2 416 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 C17orf107Q6ZR85 190 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 AQP12AQ8IXF9 295 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 ADGRG5Q8IZF4 528 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 KIR3DL3Q8N743 410 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 SCCPDHQ8NBX0 429 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 CCDC197Q8NCU1 140 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 NPRL2Q8WTW4 380 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 THEM6Q8WUY1 208 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 CCDC124Q96CT7 223 aaKnown RBP16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 AMELYQ99218 206 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 CCL13Q99616 98 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 BRD7Q9NPI1 651 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 TNFRSF19Q9NS68 423 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 C1RLQ9NZP8 487 aa16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 CAB39Q9Y376 341 aaPredicted RBP16.48■□□□□ 0.23
UBE2D3-220ENST00000505307 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms