RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 KIF20BQ96Q89 1820 aa2.9□□□□□ -1.95
HMGB1P15-201ENST00000453854 DDX60Q8IY21 1712 aaKnown RBP2.9□□□□□ -1.95
HMGB1P15-201ENST00000453854 ABCB11O95342 1321 aa2.9□□□□□ -1.95
HMGB1P15-201ENST00000453854 LAMB2P55268 1798 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF646O15015 1829 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 TRAV8-7A0A075B6U6 113 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 A0A1W2PRG6 482 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 TMEM114B3SHH9 223 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 FTCDNL1E5RQL4 147 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 G3V3Y1 287 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 K7EN84 100 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 SAP18O00422 153 aaKnown RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF593O00488 134 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 FKBP6O75344 327 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF253O75346 499 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 PSIP1O75475 530 aaKnown RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 SCRG1O75711 98 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 GPX5O75715 221 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 SLC2A10O95528 541 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ASS1P00966 412 aaKnown RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 GIMD1P0DJR0 217 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 COX5BP10606 129 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 NQO1P15559 274 aaKnown RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF7P17097 686 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 CSNK2A2P19784 350 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 RAB4AP20338 218 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 CMA1P23946 247 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 MSNP26038 577 aaKnown RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 SHC1P29353 583 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 HTR1FP30939 366 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 BTDP43251 543 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 KIR2DS2P43631 304 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 KIR2DS4P43632 304 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 RPL29P47914 159 aaKnown RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 GSSP48637 474 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 LIM2P55344 173 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ERVPABLB-1P60509 514 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 RAB14P61106 215 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 HMGCS1Q01581 520 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ASAH1Q13510 395 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 NSUN5P1Q3KNT7 163 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 KLF17Q5JT82 389 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 CLVS2Q5SYC1 327 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 TPTE2P1Q5T6R2 138 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 UBE2UQ5VVX9 321 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 THOC7Q6I9Y2 204 aaKnown RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 NIPAL1Q6NVV3 410 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 USP50Q70EL3 339 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 SLC13A5Q86YT5 568 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 BBS7Q8IWZ6 715 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 NRMQ8IXM6 262 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF786Q8N393 782 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 TMEM251Q8N6I4 163 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 POM121L12Q8N7R1 296 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 CCDC71LQ8N9Z2 235 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ACBD4Q8NC06 268 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR2L5Q8NG80 312 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR2A1Q8NGT9 310 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 SYNPRQ8TBG9 265 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 DOK4Q8TEW6 326 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 EEF1AKMT3Q96AZ1 226 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 OPTNQ96CV9 577 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 PIK3IP1Q96FE7 263 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 APOL2Q9BQE5 337 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 SRXN1Q9BYN0 137 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR51J1Q9H342 316 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 DSN1Q9H410 356 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 SLC40A1Q9NP59 571 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZDHHC4Q9NPG8 344 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 TIGARQ9NQ88 270 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 SPRR3Q9UBC9 169 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 GNPTGQ9UJJ9 305 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 TFR2Q9UP52 801 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 ELP1O95163 1332 aa2.89□□□□□ -1.95
HMGB1P15-201ENST00000453854 COL4A5P29400 1685 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 RLFQ13129 1914 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 IGLV3-22A0A075B6J6 115 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 TRAV9-2A0A087WT02 112 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 SMIM28A0A1B0GU29 152 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 A0A1B0GW55 424 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF705EA8MWA4 302 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 E5RI56 91 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 E9PAM4 449 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 K7ENP7 123 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DFFAO00273 331 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 ADAP1O75689 374 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 GAS8-AS1O95177 125 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 RAB36O95755 333 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 HPRT1P00492 218 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 OXTP01178 125 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 IFNA5P01569 189 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 CD3GP09693 182 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR8U9P0C7N5 309 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DUX4L2P0CJ85 424 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DUX4L3P0CJ86 424 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DUX4L4P0CJ87 422 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DUX4L5P0CJ88 424 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DUX4L6P0CJ89 424 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 DUX4L7P0CJ90 424 aa2.88□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF35P13682 527 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms