RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 SF3A3Q12874 501 aaKnown RBP eCLIP9.3□□□□□ -0.927e-7■■■□□ 18.1
MRPL55-212ENST00000366739 MAPRE2Q15555 327 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 DGUOKQ16854 277 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 LRRC75BQ2VPJ9 315 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 ATPAF1Q5TC12 328 aaPredicted RBP9.3□□□□□ -0.92
MRPL55-212ENST00000366739 ZBTB37Q5TC79 503 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 FOXB2Q5VYV0 432 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 LYPD4Q6UWN0 246 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 SLC15A3Q8IY34 581 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 OR9Q1Q8NGQ5 310 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 ZNRF4Q8WWF5 429 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 C12orf43Q96C57 262 aaKnown RBP9.3□□□□□ -0.92
MRPL55-212ENST00000366739 RCN3Q96D15 328 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 R3HDM4Q96D70 268 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 DUS3LQ96G46 650 aaKnown RBP9.3□□□□□ -0.92
MRPL55-212ENST00000366739 FUZQ9BT04 418 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 COPS4Q9BT78 406 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 FAM234AQ9H0X4 552 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 WDR13Q9H1Z4 485 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 OPA3Q9H6K4 179 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 SAR1AQ9NR31 198 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 HAO2Q9NYQ3 351 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 KCNG2Q9UJ96 466 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 ZNF391Q9UJN7 358 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 CAPN7Q9Y6W3 813 aa9.3□□□□□ -0.92
MRPL55-212ENST00000366739 DNAH9Q9NYC9 4486 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 ADARB2-AS1A8MUL3 147 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 ANGPTL7O43827 346 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 NCK1P16333 377 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 NDUFB7P17568 137 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 RHCEP18577 417 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 NOS3P29474 1203 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 DDOSTP39656 456 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 NAA10P41227 235 aaPredicted RBP9.29□□□□□ -0.92
MRPL55-212ENST00000366739 BMXP51813 675 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 FAM3AP98173 230 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.29□□□□□ -0.92
MRPL55-212ENST00000366739 HABP2Q14520 560 aaPredicted RBP9.29□□□□□ -0.92
MRPL55-212ENST00000366739 SLC35F1Q5T1Q4 408 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 PGBD2Q6P3X8 592 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 SLC16A9Q7RTY1 509 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 DCXRQ7Z4W1 244 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 ZDHHC21Q8IVQ6 265 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 FAM162AQ96A26 154 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 SPSB4Q96A44 273 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 GAFA1Q96PS6 74 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 RAB3IPQ96QF0 476 aaPredicted RBP9.29□□□□□ -0.92
MRPL55-212ENST00000366739 NKX3-1Q99801 234 aaPredicted RBP9.29□□□□□ -0.92
MRPL55-212ENST00000366739 NPFFR1Q9GZQ6 430 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 TLNRD1Q9H1K6 362 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 MEGF9Q9H1U4 602 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 ZNF702PQ9H963 129 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 ELL3Q9HB65 397 aaPredicted RBP9.29□□□□□ -0.92
MRPL55-212ENST00000366739 RAB18Q9NP72 206 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 KRCC1Q9NPI7 259 aaPredicted RBP9.29□□□□□ -0.92
MRPL55-212ENST00000366739 SERTAD4Q9NUC0 356 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 SLC25A10Q9UBX3 287 aaPredicted RBP9.29□□□□□ -0.92
MRPL55-212ENST00000366739 SF3B6Q9Y3B4 125 aaKnown RBP9.29□□□□□ -0.92
MRPL55-212ENST00000366739 FAM32AQ9Y421 112 aaKnown RBP9.29□□□□□ -0.92
MRPL55-212ENST00000366739 TENM3Q9P273 2699 aa9.29□□□□□ -0.92
MRPL55-212ENST00000366739 NKX6-3A6NJ46 265 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 K7EIL1 84 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 NME4O00746 187 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 TBX1O43435 398 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 XRCC2O43543 280 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 TIPRLO75663 272 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 IGLL1P15814 213 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 POU1F1P28069 291 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 GSK3BP49841 420 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 SLC7A2P52569 658 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 EMX1Q04741 257 aaPredicted RBP9.28□□□□□ -0.92
MRPL55-212ENST00000366739 BLMHQ13867 455 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 TAF13Q15543 124 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 ZNF788Q6ZQV5 615 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 ARPINQ7Z6K5 226 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 NDUFA11Q86Y39 141 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 CYB561A3Q8NBI2 242 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 PROKR2Q8NFJ6 384 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 OR4F17Q8NGA8 305 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 OR51L1Q8NGJ5 315 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 OR4C15Q8NGM1 316 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 PIFOQ8TCI5 191 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 SLAMF6Q96DU3 332 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 DHRS1Q96LJ7 313 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 OR4F4Q96R69 305 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 KCNJ15Q99712 375 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 CITED2Q99967 270 aaPredicted RBP9.28□□□□□ -0.92
MRPL55-212ENST00000366739 PAPOLGQ9BWT3 736 aaKnown RBP9.28□□□□□ -0.92
MRPL55-212ENST00000366739 DNTTIP1Q9H147 329 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 CENPMQ9NSP4 180 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 AP3M1Q9Y2T2 418 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 RHBDD3Q9Y3P4 386 aa9.28□□□□□ -0.92
MRPL55-212ENST00000366739 hCG_38984A0A1B0GV85 526 aa9.27□□□□□ -0.93
MRPL55-212ENST00000366739 H0YAE9 185 aa9.27□□□□□ -0.93
MRPL55-212ENST00000366739 SPARCP09486 303 aa9.27□□□□□ -0.93
MRPL55-212ENST00000366739 CAV3P56539 151 aa9.27□□□□□ -0.93
MRPL55-212ENST00000366739 MXRA7P84157 204 aa9.27□□□□□ -0.93
MRPL55-212ENST00000366739 AANATQ16613 207 aa9.27□□□□□ -0.93
MRPL55-212ENST00000366739 TIGD6Q17RP2 521 aa9.27□□□□□ -0.93
MRPL55-212ENST00000366739 KLHL12Q53G59 568 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms