RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 TIGD6Q17RP2 521 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 DEFB112Q30KQ8 113 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 TEX36Q5VZQ5 186 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 BRD3OSQ6XYD6 125 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 SHFQ7M4L6 423 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 TMEM86BQ8N661 226 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 TEX47Q8TBZ9 253 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 INTS14Q96SY0 518 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 PCGF1Q9BSM1 259 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 ARMC1Q9NVT9 282 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 N6AMT1Q9Y5N5 214 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 MMP24Q9Y5R2 645 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 U3KQV3 271 aa16.57■□□□□ 0.24
UBE2D3-220ENST00000505307 HOXA3O43365 443 aaPredicted RBP16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 TBX1O43435 398 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 SOX14O95416 240 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 ANXA2P07355 339 aaKnown RBP16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 FAM3AP98173 230 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 PPP1R8Q12972 351 aaKnown RBP16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 PDCD1Q15116 288 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 LINC01590Q5TEZ4 76 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 METTL11BQ5VVY1 283 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 SPATC1Q76KD6 591 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 SLC16A9Q7RTY1 509 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 FTMTQ8N4E7 242 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 GCSAMQ8N6F7 178 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 RNF133Q8WVZ7 376 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 TMIGD2Q96BF3 282 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 WDFY2Q96P53 400 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 RGCCQ9H4X1 137 aa16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 SOX21Q9Y651 276 aaPredicted RBP16.56■□□□□ 0.24
UBE2D3-220ENST00000505307 ARRDC5A6NEK1 342 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 WIPF1O43516 503 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 CRYBA1P05813 215 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 RAP2AP10114 183 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 CLUP10909 449 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 MMP9P14780 707 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 MUC1P15941 1255 aaPredicted RBP16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 PAICSP22234 425 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 ANOS1P23352 680 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 GSTT1P30711 240 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 MICBQ29980 383 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 Q6YL49 198 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 ZNF826PQ6ZT77 177 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 DPY19L4Q7Z388 723 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 FAM90A1Q86YD7 464 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 CSNK2A3Q8NEV1 391 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 OR10G2Q8NGC3 310 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 OR6N2Q8NGY6 317 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 GATAD2BQ8WXI9 593 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 SGK3Q96BR1 496 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 REEP6Q96HR9 211 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 DMRTB1Q96MA1 342 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 ABHD6Q9BV23 337 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 OR10A2Q9H208 303 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 MARCH7Q9H992 704 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 VNN3Q9NY84 501 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 PRPF19Q9UMS4 504 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 POMT1Q9Y6A1 747 aa16.55■□□□□ 0.24
UBE2D3-220ENST00000505307 MDFIC2A0A1B0GVS7 189 aa16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 GLCEO94923 617 aa16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 GYPAP02724 150 aa16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 HOXB6P17509 224 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 CALB2P22676 271 aa16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 NAA10P41227 235 aaPredicted RBP16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 GYS2P54840 703 aa16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 RPL15P61313 204 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 ERI1Q8IV48 349 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 GIPC3Q8TF64 312 aa16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 LRGUKQ96M69 825 aa16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 TBX15Q96SF7 602 aa16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 SMURF1Q9HCE7 757 aa16.54■□□□□ 0.24
UBE2D3-220ENST00000505307 CENPVL3A0A0U1RRI6 287 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 H3BN98 237 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 DVL1O14640 695 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 GPR37O15354 613 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 SFTPBP07988 381 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 GNALP38405 381 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 HOXA4Q00056 320 aaPredicted RBP16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 IL5RAQ01344 420 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 MS4A2Q01362 244 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 BTN2A1Q7KYR7 527 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 PRSS45Q7RTY3 260 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 OR1M1Q8NGA1 313 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 OR4F5Q8NH21 305 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 C12orf43Q96C57 262 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 ASB9Q96DX5 294 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 FEVQ99581 238 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 NIPSNAP1Q9BPW8 284 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 SIRPDQ9H106 197 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 BEX1Q9HBH7 125 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 ABCB9Q9NP78 766 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 ACOXLQ9NUZ1 547 aa16.53■□□□□ 0.24
UBE2D3-220ENST00000505307 hCG_38984A0A1B0GV85 526 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 FAM181BA6NEQ2 426 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 ANXA2P2A6NMY6 339 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 MDKP21741 143 aaPredicted RBP16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 OPRL1P41146 370 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 GSK3AP49840 483 aa16.52■□□□□ 0.24
UBE2D3-220ENST00000505307 ZNF121P58317 390 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms