RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 FAM157BP0CG42 384 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 CPN1P15169 458 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 ZNF529Q6P280 563 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 SIAH3Q8IW03 269 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 OR13C9Q8NGT0 318 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 OR1F12Q8NHA8 337 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 FNDC9Q8TBE3 224 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 C10orf35Q96D05 121 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 ABHD17AQ96GS6 310 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 AUNIPQ9H7T9 357 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 HMX3A6NHT5 357 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 SCGNO76038 276 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 FCGR2AP12318 317 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 GABRA1P14867 456 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 RAB6AP20340 208 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 RCVRNP35243 200 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 SNTB2Q13425 540 aaKnown RBP14.76□□□□□ -0.05
LDLR-206ENST00000557958 ZNF169Q14929 603 aaPredicted RBP14.76□□□□□ -0.05
LDLR-206ENST00000557958 TUSC5Q8IXB3 177 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 APH1AQ96BI3 265 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 ST6GAL2Q96JF0 529 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 SLX1AQ9BQ83 275 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 ATG5Q9H1Y0 275 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 TAS2R8Q9NYW2 309 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 ZNF391Q9UJN7 358 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 LIPGQ9Y5X9 500 aa14.76□□□□□ -0.05
LDLR-206ENST00000557958 TNRC6AQ8NDV7 1962 aaKnown RBP14.75□□□□□ -0.05
LDLR-206ENST00000557958 METTL21EPA6NDL7 271 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 OR6C6A6NF89 314 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 RPL36A-HNRNPH2H7BZ11 118 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 SYNGR3O43761 229 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 DHRS3O75911 302 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 BPNT1O95861 308 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 ZNF24P17028 368 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 SRP9P49458 86 aaKnown RBP14.75□□□□□ -0.05
LDLR-206ENST00000557958 KLF9Q13886 244 aaPredicted RBP14.75□□□□□ -0.05
LDLR-206ENST00000557958 ZFP69Q49AA0 526 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 TSPO2Q5TGU0 170 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 OR52I2Q8NH67 350 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 PP6455Q8WZ26 134 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 CALHM2Q9HA72 323 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 GP6Q9HCN6 339 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 ZNF71Q9NQZ8 489 aaPredicted RBP14.75□□□□□ -0.05
LDLR-206ENST00000557958 UPB1Q9UBR1 384 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 ATPIF1Q9UII2 106 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 DMXL2Q8TDJ6 3036 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 APC2O95996 2303 aa14.75□□□□□ -0.05
LDLR-206ENST00000557958 IGLV3-1P01715 115 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 ZNF32P17041 273 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 CRYGSP22914 178 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 THBS4P35443 961 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 ZNF93P35789 620 aaPredicted RBP14.74□□□□□ -0.05
LDLR-206ENST00000557958 HTR5AP47898 357 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 BTG1P62324 171 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 TATDN3Q17R31 274 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 PLA1AQ53H76 456 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 RAB12Q6IQ22 244 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 UNQ6494/PRO21346Q6UXR6 183 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 SLC7A5P1Q8MH63 180 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 UPRTQ96BW1 309 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 OR2H1Q9GZK4 316 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 ZNF319Q9P2F9 582 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 RAB22AQ9UL26 194 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 ZNF175Q9Y473 711 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 NUBP2Q9Y5Y2 271 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 DHRS7CA6NNS2 312 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 INMT-MINDY4F8WBC2 141 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 DHFRP00374 187 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 TMIGD3P0DMS9 266 aaPredicted RBP14.74□□□□□ -0.05
LDLR-206ENST00000557958 HLA-DMAP28067 261 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 FAUP35544 74 aaKnown RBP14.74□□□□□ -0.05
LDLR-206ENST00000557958 EFNB2P52799 333 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 UCNP55089 124 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 SSBP1Q04837 148 aaKnown RBP14.74□□□□□ -0.05
LDLR-206ENST00000557958 FAM189A2Q15884 450 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 IGFL3Q6UXB1 125 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 LYPD6Q86Y78 171 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 ZNF100Q8IYN0 542 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 OR52N4Q8NGI2 321 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 OR14K1Q8NGZ2 314 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 UBASH3BQ8TF42 649 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 CNTD2Q9H8S5 307 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 SLC7A10Q9NS82 523 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 TP53TG5Q9Y2B4 290 aa14.74□□□□□ -0.05
LDLR-206ENST00000557958 TRAV18A0A075B6X5 111 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 MED19A0JLT2 244 aaPredicted RBP14.73□□□□□ -0.05
LDLR-206ENST00000557958 RBBP9O75884 186 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 ALDOBP05062 364 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 HCKP08631 526 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 ABOP16442 354 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 C3AR1Q16581 482 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 C1QTNF12Q5T7M4 302 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 ZNF774Q6NX45 483 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 CDH24Q86UP0 819 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 PNLDC1Q8NA58 520 aaKnown RBP14.73□□□□□ -0.05
LDLR-206ENST00000557958 ZCCHC14Q8WYQ9 949 aaKnown RBP14.73□□□□□ -0.05
LDLR-206ENST00000557958 WDYHV1Q96HA8 205 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 CACNG6Q9BXT2 260 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 ACTR6Q9GZN1 396 aa14.73□□□□□ -0.05
LDLR-206ENST00000557958 RGCCQ9H4X1 137 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms