RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 HMGCLP35914 325 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 RBM34P42696 430 aaKnown RBP2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 GPM6AP51674 278 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 UBE2KP61086 200 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 REEP5Q00765 189 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 MS4A2Q01362 244 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 SP4Q02446 784 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 PUDPQ08623 228 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 PPIDQ08752 370 aaKnown RBP2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 SLC10A7Q0GE19 358 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 ECH1Q13011 328 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 TPBGQ13641 420 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 TAL2Q16559 108 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 CNPY1Q3B7I2 92 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 PARP15Q460N3 678 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZNF658Q5TYW1 1059 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 OR2G6Q5TZ20 316 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 SDHAF4Q5VUM1 108 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZNF57Q68EA5 555 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 GSG1LQ6UXU4 331 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 PEX26Q7Z412 305 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 LHFPL3Q86UP9 236 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 PIANPQ8IYJ0 282 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 SLC22A18ASQ8N1D0 253 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 CYP4Z2PQ8N1L4 340 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 OR6T1Q8NGN1 323 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 OR6X1Q8NH79 312 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 DNAJB3Q8WWF6 145 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 RASL10AQ92737 203 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 B3GALT6Q96L58 329 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZNF75AQ96N20 296 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 HBEGFQ99075 208 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 TSNAXQ99598 290 aaKnown RBP2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 MCHR1Q99705 422 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 FOXC2Q99958 501 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 SELENOSQ9BQE4 189 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 AGMATQ9BSE5 352 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 NICN1Q9BSH3 213 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 TMEM38AQ9H6F2 299 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 CAB39LQ9H9S4 337 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 PLEKHA1Q9HB21 404 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 FOLH1BQ9HBA9 442 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 BEX1Q9HBH7 125 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 TMBIM4Q9HC24 238 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 PLEKHJ1Q9NW61 149 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 SDHAF2Q9NX18 166 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZNF581Q9P0T4 197 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 RSPH14Q9UHP6 348 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 RIMS3Q9UJD0 308 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 ING4Q9UNL4 249 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 ASF1AQ9Y294 204 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 STYXL1Q9Y6J8 313 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZSWIM8A7E2V4 1837 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 CARMIL3Q8ND23 1372 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 A0A1B0GU03 582 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 A6NDN8 102 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 VSTM2BA6NLU5 285 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 HIDE1A8MVS5 230 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 M0R036 132 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 SULT1C2O00338 296 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 CYTH3O43739 400 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 CDC40O60508 579 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 EIF3GO75821 320 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 SEMA3DO95025 777 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 RCBTB2O95199 551 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 PSMG1O95456 288 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 CATP04040 527 aaKnown RBP2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 IFNA6P05013 189 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 RPSAP08865 295 aaKnown RBP2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACSM4P0C7M7 580 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 CALM1P0DP23 149 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 CALM2P0DP24 149 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 CALM3P0DP25 149 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 PSMB5P28074 263 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 EPHX2P34913 555 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 RAP1GDS1P52306 607 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACTBP60709 375 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACTA2P62736 377 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACTG1P63261 375 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACTG2P63267 376 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACTC1P68032 377 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACTA1P68133 377 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 MRPS25P82663 173 aaKnown RBP2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 GLO1Q04760 184 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 ST3GAL4Q11206 333 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 TFDP2Q14188 446 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 FLOT2Q14254 428 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 CAPRIN1Q14444 709 aaKnown RBP2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 TMEM249Q2WGJ8 235 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 NDUFAF6Q330K2 333 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 BSXQ3C1V8 233 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 KRTAP27-1Q3LI81 207 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 AKIRIN2Q53H80 203 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACTL10Q5JWF8 245 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 CPTPQ5TA50 214 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 OLFML2AQ68BL7 652 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 TFAP2EQ6VUC0 442 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 AHSA2Q719I0 299 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 TMEM150AQ86TG1 271 aa2.91□□□□□ -1.94
HMGB1P15-201ENST00000453854 CA13Q8N1Q1 262 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms