RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 ERMNQ8TAM6 284 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 PHOSPHO2Q8TCD6 241 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 ITLN1Q8WWA0 313 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 OR8D1Q8WZ84 308 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 PSMG2Q969U7 264 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 PAGE5Q96GU1 130 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 PSMB7Q99436 277 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 GPR21Q99679 349 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 PARD6GQ9BYG4 376 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZBP1Q9H171 429 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 TRIM45Q9H8W5 580 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 SIAEQ9HAT2 523 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 MRM3Q9HC36 420 aaKnown RBP2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 SIRT7Q9NRC8 400 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 RHBDL2Q9NX52 303 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 PRG3Q9Y2Y8 225 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 PLLPQ9Y342 182 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 GOLT1BQ9Y3E0 138 aa2.94□□□□□ -1.94
HMGB1P15-201ENST00000453854 HCFC1P51610 2035 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 ROCK1Q13464 1354 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 FAM220BPB1ANY3 271 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZNF487B1APH4 448 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 SEC14L6B5MCN3 397 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 LRRN3E7EW58 273 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 H7C2Y5 167 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 M0QXV9 152 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 SLC31A1O15431 190 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 VENTXO95231 258 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 TNFAIP8O95379 198 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 DEXIO95424 95 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACTL6AO96019 429 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 CTXN2P0C2S0 81 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 OR1E1P30953 314 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 CEACAM3P40198 252 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 PPP1R2P41236 205 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 ALDH3B2P48448 385 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 CSNK1A1P48729 337 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 CSNK1DP48730 415 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 VEGFCP49767 419 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 RPL10AP62906 217 aaKnown RBP2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 BCL2L1Q07817 233 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 ABRAXAS2Q15018 415 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 ARL6IP1Q15041 203 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 LTB4RQ15722 352 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 MICAQ29983 383 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 COX19Q49B96 90 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 TTMPQ5BVD1 217 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 RWDD4Q6NW29 188 aaKnown RBP2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 PPP1R2P3Q6NXS1 205 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 TRIM40Q6P9F5 258 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 WDR82Q6UXN9 313 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZNF677Q86XU0 584 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 BOD1L2Q8IYS8 172 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 VKORC1L1Q8N0U8 176 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 TTLQ8NG68 377 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZNF502Q8TBZ5 544 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 TFB1MQ8WVM0 346 aaKnown RBP2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 IFT81Q8WYA0 676 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 DUS3LQ96G46 650 aaKnown RBP2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 MRPL45Q9BRJ2 306 aaKnown RBP2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 HCAR1Q9BXC0 346 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 TOLLIPQ9H0E2 274 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 WDR55Q9H6Y2 383 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 EML4Q9HC35 981 aaKnown RBP2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACP6Q9NPH0 428 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 CTPS2Q9NRF8 586 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 AGPAT4Q9NRZ5 378 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 FKBP14Q9NWM8 211 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 PAK1IP1Q9NWT1 392 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 IMPAD1Q9NX62 359 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 GIN1Q9NXP7 522 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 BTNL2Q9UIR0 455 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 RAB23Q9ULC3 237 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACOT9Q9Y305 439 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 MOB4Q9Y3A3 225 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 CDH23Q9H251 3354 aa2.93□□□□□ -1.94
HMGB1P15-201ENST00000453854 LOC100131303A0A0U1RQF7 123 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 TRABD2BA6NFA1 517 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 GOLGA8JA6NMD2 632 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 HACD1B0YJ81 288 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 GOLGA8KD6RF30 607 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 E9PLD3 99 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 GOLGA8MH3BSY2 632 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 SLC17A2O00624 439 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 SLC9A3R1O14745 358 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 SLC16A4O15374 487 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 CRXO43186 299 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 ERI3O43414 337 aaKnown RBP2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 GALR3O60755 368 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 AQP8O94778 261 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 KBTBD11O94819 623 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 TDP2O95551 362 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 RETP07949 1114 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 GOLGA8HP0CJ92 632 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 RD3LP0DJH9 198 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 CT45A10P0DMU9 189 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 MAGP20916 626 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 SLC2A5P22732 501 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 HLA-DMAP28067 261 aa2.92□□□□□ -1.94
HMGB1P15-201ENST00000453854 MAS1LP35410 378 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms