RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 GK2Q14410 553 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 AWAT1Q58HT5 328 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 KLF17Q5JT82 389 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 ZNF620Q6ZNG0 422 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 CFAP77Q6ZQR2 320 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 CPLX4Q7Z7G2 160 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 MOGAT3Q86VF5 341 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 KLBQ86Z14 1044 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 BHLHE23Q8NDY6 225 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 NEIL1Q96FI4 390 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 CDRT15Q96T59 188 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 FAM107BQ9H098 131 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 ZNF69Q9UC07 566 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 PPIAL4AQ9Y536 164 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 ARPC2O15144 300 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 HKR1P10072 659 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 ZNF823P16415 610 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 CD80P33681 288 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 HMGA2P52926 109 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 GNB2P62879 340 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 PAX2Q02962 417 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 ZNF404Q494X3 552 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 PGAP1Q75T13 922 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 LINC00346Q8IVM7 164 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 SDR9C7Q8NEX9 313 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 OR8B3Q8NGG8 313 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 OR52L1Q8NGH7 329 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 OR52E2Q8NGJ4 325 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 OR11L1Q8NGX0 322 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 Q8TCH9 128 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 RAB40AQ8WXH6 277 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 SPTSSAQ969W0 71 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 OR8B2Q96RD0 313 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 TMEM246Q9BRR3 403 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 WDR76Q9H967 626 aa16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 PNRC2Q9NPJ4 139 aaKnown RBP16.72■□□□□ 0.27
UBE2D3-220ENST00000505307 SPRY1O43609 319 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 RBMXP38159 391 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 CD200P41217 278 aa16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 MTNR1AP48039 350 aa16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 PGBD2Q6P3X8 592 aa16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 C16orf89Q6UX73 402 aa16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 ZDHHC21Q8IVQ6 265 aa16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 OR2T4Q8NH00 348 aa16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 SPRYD4Q8WW59 207 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 MS4A7Q9GZW8 240 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 TAGLN3Q9UI15 199 aa16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 CDH10Q9Y6N8 788 aa16.71■□□□□ 0.27
UBE2D3-220ENST00000505307 IGHV2-70DA0A0C4DH43 119 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 CLDN34H7C241 214 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 M0R135 149 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 RAD23AP54725 363 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 BAMBIQ13145 260 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 SLC35F1Q5T1Q4 408 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 DCDC5Q6ZRR9 648 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 C9orf139Q6ZV77 190 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 MRPL21Q7Z2W9 205 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 PLPP7Q8NBV4 271 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 OR4C15Q8NGM1 316 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 SLCO4A1Q96BD0 722 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 UPRTQ96BW1 309 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 ZNF799Q96GE5 643 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 TRIM15Q9C019 465 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 MRPL22Q9NWU5 206 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 IL20Q9NYY1 176 aa16.7■□□□□ 0.26
UBE2D3-220ENST00000505307 KIR2DS1A0A191URI9 304 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 PHYHO14832 338 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 ZNF205O95201 554 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 HLA-DPB1P04440 258 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 MSX2P35548 267 aaPredicted RBP16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 PMELP40967 661 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 PITPNBP48739 271 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 MNAT1P51948 309 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 MAB21L1Q13394 359 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 KCNJ8Q15842 424 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 PARP8Q8N3A8 854 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 PROKR2Q8NFJ6 384 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 SLC25A28Q96A46 364 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 DACT3Q96B18 629 aaPredicted RBP16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 MAP6Q96JE9 813 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 ZNF747Q9BV97 191 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 FN3KQ9H479 309 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 CLN8Q9UBY8 286 aa16.69■□□□□ 0.26
UBE2D3-220ENST00000505307 DNAJC9-AS1A6NH13 148 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 CD300LBA8K4G0 201 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 BHLHE40O14503 412 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 GMDSO60547 372 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 EGR1P18146 543 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 CLEC12AQ5QGZ9 265 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 SHISA2Q6UWI4 295 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 DRAM2Q6UX65 266 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 NAA40Q86UY6 237 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 BCL6BQ8N143 479 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 SPERTQ8NA61 448 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 DDOQ99489 341 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 FN3KRPQ9HA64 309 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 ARL2BPQ9Y2Y0 163 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 LYVE1Q9Y5Y7 322 aa16.68■□□□□ 0.26
UBE2D3-220ENST00000505307 IGHV3-64DA0A0J9YX35 117 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms