RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 ERFP50548 548 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 SPIBQ01892 262 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 TUSC1Q2TAM9 212 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 ZBTB46Q86UZ6 589 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 C1orf87Q8N0U7 546 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 OR6V1Q8N148 313 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 ZDHHC22Q8N966 263 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 SLC26A10Q8NG04 563 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 CDADC1Q9BWV3 514 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 C1QTNF5Q9BXJ0 243 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 SRA1Q9HD15 236 aaKnown RBP16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 TMCC3Q9ULS5 477 aa16.78■□□□□ 0.28
UBE2D3-220ENST00000505307 A0A1B0GWJ7 208 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 CEACAM18A8MTB9 384 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 TRAPPC2LH3BP13 241 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 OR10H3O60404 316 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 SEMG1P04279 462 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 WNT2P09544 360 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 UBA52P62987 128 aaKnown RBP16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 MEP1BQ16820 701 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 KRTAP27-1Q3LI81 207 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 SAMD4BQ5PRF9 694 aaKnown RBP16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 RNF148Q8N7C7 305 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 OR2AJ1Q8NGZ0 328 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 SGMS2Q8NHU3 365 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 NMNAT3Q96T66 252 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 IFT27Q9BW83 186 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 PLA2G12AQ9BZM1 189 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 NSRP1Q9H0G5 558 aaKnown RBP16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 ZMAT3Q9HA38 289 aaKnown RBP16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 TMEM100Q9NV29 134 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 MIOXQ9UGB7 285 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 KCNG2Q9UJ96 466 aa16.77■□□□□ 0.28
UBE2D3-220ENST00000505307 TENM1Q9UKZ4 2725 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 GPANK1O95872 356 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 PPIAL4GP0DN37 164 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 HIST1H1CP16403 213 aaKnown RBP16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 MALLQ13021 153 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 SPATS1Q496A3 300 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 SLC18B1Q6NT16 456 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 CORO6Q6QEF8 472 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 DOK3Q7L591 496 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 CELF2-AS1Q8N7Q2 184 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 OR10AD1Q8NGE0 317 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 OR4K13Q8NH42 304 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 C22orf15Q8WYQ4 148 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 ERGIC1Q969X5 290 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 PLEKHA8Q96JA3 519 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 NSMCE2Q96MF7 247 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 PITX2Q99697 317 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 TMEM165Q9HC07 324 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 ESM1Q9NQ30 184 aa16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 RPRD1BQ9NQG5 326 aaKnown RBP16.76■□□□□ 0.27
UBE2D3-220ENST00000505307 ATP8B1O43520 1251 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 SNX3O60493 162 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 FABP3P05413 133 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 GATA4P43694 442 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 GSSP48637 474 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 SEC61A1P61619 476 aaKnown RBP16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 PAX8Q06710 450 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 TSPAN31Q12999 210 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 RSPO1Q2MKA7 263 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 RPL13AP3Q6NVV1 102 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 BTNL3Q6UXE8 466 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 PGAM4Q8N0Y7 254 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 GNPDA2Q8TDQ7 276 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 ATF6BQ99941 703 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 SSBP3Q9BWW4 388 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 IL1RAPQ9NPH3 570 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 CYB5R1Q9UHQ9 305 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 NOP16Q9Y3C1 178 aaKnown RBP16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 V9GYQ6 96 aa16.75■□□□□ 0.27
UBE2D3-220ENST00000505307 F5H5K5 113 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 KRT36O76013 467 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 HLA-DQA2P01906 255 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 ACSM4P0C7M7 580 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 RPS2P15880 293 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 FOXL1Q12952 345 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 HNRNPA0Q13151 305 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 LRRN1Q6UXK5 716 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 NLRC3Q7RTR2 1065 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 LINC00471Q8N535 108 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 SIGLECL1Q8N7X8 197 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 ZNF420Q8TAQ5 688 aaPredicted RBP16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 SLC22A4Q9H015 551 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 NDE1Q9NXR1 346 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 CD300AQ9UGN4 299 aa16.74■□□□□ 0.27
UBE2D3-220ENST00000505307 OR6C68A6NDL8 312 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 F5H5P2 479 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 H0YL77 283 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 MLNRO43193 412 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 CYB5R3P00387 301 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 LCATP04180 440 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 IRF2P14316 349 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 PRTN3P24158 256 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 RRM2P31350 389 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 GGT2P36268 569 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 TPTEP56180 551 aa16.73■□□□□ 0.27
UBE2D3-220ENST00000505307 TRAP1Q12931 704 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms