RNA–Protein interactions for RNA: ENST00000365155.1

RNU6-1240P-201, Transcript of RNA, U6 small nuclear 1240, pseudogene, humanhuman

BASIC

Gene RNU6-1240P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1240P-201ENST00000365155 SLC17A4Q9Y2C5 497 aa0.96□□□□□ -2.26
RNU6-1240P-201ENST00000365155 BRCA1P38398 1863 aaKnown RBP0.96□□□□□ -2.26
RNU6-1240P-201ENST00000365155 TRAV19A0A0A6YYK7 116 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 IGHV3-72A0A0B4J1Y9 119 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 A0A1B0GW55 424 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SMCO3A2RU48 225 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 ZNF233A6NK53 670 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 KRBOX1C9JBD0 128 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 C9JVG2 144 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 H7C1H1 209 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 UBXN8O00124 270 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SCAMP2O15127 329 aaKnown RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SLC22A5O76082 557 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 GLSO94925 669 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 OR2F2O95006 317 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CD160O95971 181 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 FTH1P02794 183 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 DUX4L2P0CJ85 424 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 DUX4L3P0CJ86 424 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 DUX4L5P0CJ88 424 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 DUX4L6P0CJ89 424 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 DUX4L7P0CJ90 424 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 IL1RNP18510 177 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 PTMSP20962 102 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 ME2P23368 584 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 OR1E1P30953 314 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 RRM2P31350 389 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 OTX1P32242 354 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 POLR2IP36954 125 aaKnown RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 RBM34P42696 430 aaKnown RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 RPL23P62829 140 aaKnown RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CCNA1P78396 465 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CDK5Q00535 292 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 IFT88Q13099 833 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SRSF5Q13243 272 aaKnown RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SLC39A6Q13433 755 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 DGCR6Q14129 220 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 PIGHQ14442 188 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 ZNF266Q14584 549 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 TRAM2Q15035 370 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 ALKBH6Q3KRA9 238 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 HSP90AB3PQ58FF7 597 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 ARMC12Q5T9G4 340 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 FAM222AQ5U5X8 452 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 LRRC66Q68CR7 880 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 C12orf54Q6X4T0 127 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 MBOAT2Q6ZWT7 520 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 MRPL55Q7Z7F7 128 aaKnown RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CBLN2Q8IUK8 224 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 NKAIN4Q8IVV8 208 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 TMEM105Q8N8V8 129 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SPANXA2-OT1Q8N9U9 137 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 TTLQ8NG68 377 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 OR13G1Q8NGZ3 307 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 LYPD6BQ8NI32 183 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CAPSLQ8WWF8 208 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SLC38A4Q969I6 547 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 DCPSQ96C86 337 aaKnown RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 ECHDC3Q96DC8 303 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 RNF145Q96MT1 663 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 ZNF317Q96PQ6 595 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 TGS1Q96RS0 853 aaKnown RBP0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 TBL1YQ9BQ87 522 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SULT4A1Q9BR01 284 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 TEKT3Q9BXF9 490 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 C1orf198Q9H425 327 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 TMEM165Q9HC07 324 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 RETNQ9HD89 108 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 MTCH1Q9NZJ7 389 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SLC17A7Q9P2U7 560 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 DUX4Q9UBX2 424 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 ENOPH1Q9UHY7 261 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 TRIP11Q15643 1979 aa0.95□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SHANK1Q9Y566 2161 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 COL5A1P20908 1838 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 PCDH11XQ9BZA7 1347 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 TRAV6A0A075B6T7 132 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 SMIM26A0A096LP01 95 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 IGHV7-4-1A0A0J9YVY3 117 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CENPVL3A0A0U1RRI6 287 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 GABRR3A8MPY1 467 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 PLPP1O14494 284 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 NVLO15381 856 aaKnown RBP0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 RAD51CO43502 376 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CHST10O43529 356 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CIB2O75838 187 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 MYL2P10916 166 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CSNK2A2P19784 350 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 BCKDHBP21953 392 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 BMI1P35226 326 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 HMGN5P82970 282 aaKnown RBP0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 LIPEQ05469 1076 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 IDI1Q13907 227 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 NCF4Q15080 339 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 PSMD5Q16401 504 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 HSDL1Q3SXM5 330 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CCDC183Q5T5S1 534 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 CARD17Q5XLA6 110 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 H3F3CQ6NXT2 135 aa0.94□□□□□ -2.26
RNU6-1240P-201ENST00000365155 GUSBP11Q6P575 273 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms