RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 C4orf36Q96KX1 117 aa9.31□□□□□ -0.92
SF3B2-201ENST00000322535 MRGPRX1Q96LB2 322 aa9.31□□□□□ -0.92
SF3B2-201ENST00000322535 HIST1H2BNQ99877 126 aa9.31□□□□□ -0.92
SF3B2-201ENST00000322535 HIST1H2BMQ99879 126 aa9.31□□□□□ -0.92
SF3B2-201ENST00000322535 ZNF426Q9BUY5 554 aa9.31□□□□□ -0.92
SF3B2-201ENST00000322535 KCNK6Q9Y257 313 aa9.31□□□□□ -0.92
SF3B2-201ENST00000322535 URGCP-MRPS24S4R325 110 aa9.31□□□□□ -0.92
SF3B2-201ENST00000322535 TMEM235A6NFC5 223 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 VSTM5A8MXK1 200 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 K7EP13 123 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 NPC1O15118 1278 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 FGF16O43320 207 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 FRS3O43559 492 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 HYAL3O43820 417 aaPredicted RBP9.3□□□□□ -0.92
SF3B2-201ENST00000322535 OR2F2O95006 317 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 PAPLNO95428 1278 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 HLA-GP17693 338 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 BRS3P32247 399 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 NRG3P56975 720 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 REEP5Q00765 189 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 OR2F1Q13607 317 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 KRTCAP3Q53RY4 240 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 UBE2NLQ5JXB2 153 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 C11orf87Q6NUJ2 197 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 ACOT7LQ6ZUV0 252 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 SLC35E3Q7Z769 313 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 OR7G2Q8NG99 324 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 OR52N4Q8NGI2 321 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 SYNPRQ8TBG9 265 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 HAS2Q92819 552 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 UBQLN3Q9H347 655 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 ZNF430Q9H8G1 570 aaPredicted RBP9.3□□□□□ -0.92
SF3B2-201ENST00000322535 SUSD2Q9UGT4 822 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 TCFL5Q9UL49 500 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 FBXO7Q9Y3I1 522 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 CHD3Q12873 2000 aaKnown RBP9.3□□□□□ -0.92
SF3B2-201ENST00000322535 IGLV3-16A0A075B6K0 115 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 OR52A4PA6NMU1 304 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 GTF2F2P13984 249 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 GALP22466 123 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 CDK2P24941 298 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 GPR4P46093 362 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 IDH3GP51553 393 aaPredicted RBP9.3□□□□□ -0.92
SF3B2-201ENST00000322535 AFF3P51826 1226 aaKnown RBP9.3□□□□□ -0.92
SF3B2-201ENST00000322535 PCBP4P57723 403 aaKnown RBP9.3□□□□□ -0.92
SF3B2-201ENST00000322535 IL10RAQ13651 578 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 BATFQ16520 125 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 MAPK14Q16539 360 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 MST1LQ2TV78 715 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 LY6G6FQ5SQ64 297 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 STPG1Q5TH74 334 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 PRAMEF17Q5VTA0 474 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 GGNBP1Q5YKI7 109 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 ABLIM2Q6H8Q1 611 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 PTCRAQ6ISU1 281 aaPredicted RBP9.3□□□□□ -0.92
SF3B2-201ENST00000322535 SLC38A5Q8WUX1 472 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 MR1Q95460 341 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 NTNG2Q96CW9 530 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 DNAJA3Q96EY1 480 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 PHYHIPLQ96FC7 376 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 HIST1H2BLQ99880 126 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 ZNF649Q9BS31 505 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 RAB33BQ9H082 229 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 PCBD2Q9H0N5 130 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 ABRACLQ9P1F3 81 aa9.3□□□□□ -0.92
SF3B2-201ENST00000322535 A0A1B0GV50 99 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 ZNF264O43296 627 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 SLC16A8O95907 504 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 IFNA6P05013 189 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 CTXN2P0C2S0 81 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 OR4A8P0C604 315 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 CD79AP11912 226 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 BUD31P41223 144 aaPredicted RBP9.29□□□□□ -0.92
SF3B2-201ENST00000322535 NAA10P41227 235 aaPredicted RBP9.29□□□□□ -0.92
SF3B2-201ENST00000322535 GUCA2AQ02747 115 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 HIST2H3PS2Q5TEC6 136 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 ZNF776Q68DI1 518 aaPredicted RBP9.29□□□□□ -0.92
SF3B2-201ENST00000322535 SELENOHQ8IZQ5 122 aaKnown RBP9.29□□□□□ -0.92
SF3B2-201ENST00000322535 PNLDC1Q8NA58 520 aaKnown RBP9.29□□□□□ -0.92
SF3B2-201ENST00000322535 OR5AP2Q8NGF4 316 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 TERB2Q8NHR7 220 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 S100A16Q96FQ6 103 aaKnown RBP9.29□□□□□ -0.92
SF3B2-201ENST00000322535 ADGRG7Q96K78 797 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 ALKBH7Q9BT30 221 aaPredicted RBP9.29□□□□□ -0.92
SF3B2-201ENST00000322535 TIMM10BQ9Y5J6 103 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 A0A087WZY1 265 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 TRBV11-1A0A0K0K1C0 115 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 C13orf42A0A1B0GVH6 325 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 MASP2O00187 686 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 ZNF432O94892 652 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 TPT1P13693 172 aaKnown RBP9.29□□□□□ -0.92
SF3B2-201ENST00000322535 PNLIPP16233 465 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 TYRP1P17643 537 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 CDK3Q00526 305 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 TSPAN31Q12999 210 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 C4orf17Q53FE4 359 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 ZNF311Q5JNZ3 666 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 LYPLAL1Q5VWZ2 237 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 TEX38Q6PEX7 206 aa9.29□□□□□ -0.92
SF3B2-201ENST00000322535 ZNF836Q6ZNA1 936 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms