RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 MAPK3P27361 379 aaPredicted RBP16.08■□□□□ 0.16
SCARB1-208ENST00000544327 DPP4P27487 766 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 GRPRP30550 384 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 SRP9P49458 86 aaKnown RBP16.08■□□□□ 0.16
SCARB1-208ENST00000544327 PNLIPRP2P54317 469 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 KLF9Q13886 244 aaPredicted RBP16.08■□□□□ 0.16
SCARB1-208ENST00000544327 HLA-DQA1Q5Y7H0 255 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 FAM199XQ6PEV8 388 aaPredicted RBP16.08■□□□□ 0.16
SCARB1-208ENST00000544327 PRR22Q8IZ63 422 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 CMTM4Q8IZR5 234 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 OR1N1Q8NGS0 311 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 KLHL15Q96M94 604 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 GON7Q9BXV9 100 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 WDR76Q9H967 626 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 PLSCR3Q9NRY6 295 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 BOLA1Q9Y3E2 137 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 SZT2Q5T011 3432 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 MPDZO75970 2070 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 CEP290O15078 2479 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 ARPC4-TTLL3A0A0A6YYG9 625 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 ACOD1A6NK06 481 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 DCTN6O00399 190 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 HCRTR2O43614 444 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 ZNF432O94892 652 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 CD3GP09693 182 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 OR8G3PP0DMU2 310 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 PGCP20142 388 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 GPLD1P80108 840 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 Q499Y3 187 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 Q5BKY6 102 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 LIPNQ5VXI9 398 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 SLC22A10Q63ZE4 541 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 UTS2BQ765I0 119 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 KRT74Q7RTS7 529 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 OR6V1Q8N148 313 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 LILRB4Q8NHJ6 448 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 GFM1Q96RP9 751 aaKnown RBP16.07■□□□□ 0.16
SCARB1-208ENST00000544327 GHITMQ9H3K2 345 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 ZNF346Q9UL40 294 aaKnown RBP16.07■□□□□ 0.16
SCARB1-208ENST00000544327 TMEM14AQ9Y6G1 99 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 V9GY05 133 aa16.07■□□□□ 0.16
SCARB1-208ENST00000544327 A0A0A6YYJ9 748 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 AGRPO00253 132 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 NDUFB5O43674 189 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 TCRBP04435 133 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 CALCBP10092 127 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 FOLR1P15328 257 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 ALOX5APP20292 161 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 IGFBP4P22692 258 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 CXCR1P25024 350 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 NR0B1P51843 470 aaKnown RBP16.06■□□□□ 0.16
SCARB1-208ENST00000544327 ZP2Q05996 745 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 PLCXD2Q0VAA5 305 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 CDH24Q86UP0 819 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 EID2Q8N6I1 236 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 OR5AK2Q8NH90 309 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 SLC25A38Q96DW6 304 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 OMA1Q96E52 524 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 SRA1Q9HD15 236 aaKnown RBP16.06■□□□□ 0.16
SCARB1-208ENST00000544327 TAS2R5Q9NYW4 299 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 FRRS1LQ9P0K9 344 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 COPS7AQ9UBW8 275 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 CLEC4AQ9UMR7 237 aa16.06■□□□□ 0.16
SCARB1-208ENST00000544327 TP53BP1Q12888 1972 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-208ENST00000544327 A0A1B0GX78 115 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 SULT1B1O43704 296 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 NPIPB7O75200 414 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 TPPPO94811 219 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 GP1BBP13224 206 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 GLB1P16278 677 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 CSF2RBP32927 897 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 MNDAP41218 407 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 CBFBQ13951 182 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 UBXN2BQ14CS0 331 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 NSDHLQ15738 373 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 BCL2L15Q5TBC7 163 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 SLC29A4Q7RTT9 530 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 MAMDC2Q7Z304 686 aaPredicted RBP16.05■□□□□ 0.16
SCARB1-208ENST00000544327 MARCH3Q86UD3 253 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 PLPP5Q8NEB5 264 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 ZFP3Q96NJ6 502 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 OR2M2Q96R28 347 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 PTDSS2Q9BVG9 487 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 TBL1XR1Q9BZK7 514 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 NRSN2Q9GZP1 204 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 VN1R1Q9GZP7 353 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 SLITRK2Q9H156 845 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 NUDT15Q9NV35 164 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 AKAP7Q9P0M2 348 aaPredicted RBP16.05■□□□□ 0.16
SCARB1-208ENST00000544327 LAMP5Q9UJQ1 280 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 SPTBN5Q9NRC6 3674 aaKnown RBP16.05■□□□□ 0.16
SCARB1-208ENST00000544327 TRBV5-7A0A0A0MS05 114 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 TRABD2BA6NFA1 517 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 OR4C45A6NMZ5 311 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 PSMD9O00233 223 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 AKR7A3O95154 331 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 RAF1P04049 648 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 PRKCAP17252 672 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 EVI2BP34910 448 aa16.05■□□□□ 0.16
SCARB1-208ENST00000544327 CSNK1EP49674 416 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms