RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 LYPD3O95274 346 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 ZNF682O95780 498 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 POU2F1P14859 743 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 GGT1P19440 569 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 KIR2DL3P43628 341 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 SWT1Q5T5J6 900 aaKnown RBP16.02■□□□□ 0.16
CPSF4-205ENST00000440514 PAQR6Q6TCH4 344 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 C16orf89Q6UX73 402 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 WDR88Q6ZMY6 472 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 GDF7Q7Z4P5 450 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 VTCN1Q7Z7D3 282 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 LINC01560Q8TB33 94 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 ADAMTS16Q8TE57 1224 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 SLC25A36Q96CQ1 311 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 NAA11Q9BSU3 229 aaPredicted RBP16.02■□□□□ 0.16
CPSF4-205ENST00000440514 PCDHAC1Q9H158 963 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 EMC3Q9P0I2 261 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 SEC14L4Q9UDX3 406 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 SLC7A7Q9UM01 511 aa16.02■□□□□ 0.16
CPSF4-205ENST00000440514 TRAPPC13A5PLN9 417 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 AQP7P3A6NL99 342 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 CHP2O43745 196 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 SERPINA1P01009 418 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 TCN1P20061 433 aaPredicted RBP16.01■□□□□ 0.15
CPSF4-205ENST00000440514 SLC16A1P53985 500 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 SELENOWP63302 87 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 PDK3Q15120 406 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 DEFB107AQ8IZN7 70 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 MFSD8Q8NHS3 518 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 LZICQ8WZA0 190 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 TAAR8Q969N4 342 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 FAM162AQ96A26 154 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 ELOVL5Q9NYP7 299 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 KCNN3Q9UGI6 736 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 PRSS50Q9UI38 385 aa16.01■□□□□ 0.15
CPSF4-205ENST00000440514 ANKHD1Q8IWZ3 2542 aaKnown RBP16.01■□□□□ 0.15
CPSF4-205ENST00000440514 TRAV36DV7A0A075B6V5 113 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 TUBAL3A6NHL2 446 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 CBLP22681 906 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 GTF2E2P29084 291 aaKnown RBP16■□□□□ 0.15
CPSF4-205ENST00000440514 PEX19P40855 299 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 P2RY4P51582 365 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 FAM69AQ5T7M9 428 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 C5orf46Q6UWT4 87 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 CBLL1Q75N03 491 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 GALNT5Q7Z7M9 940 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 STK32CQ86UX6 486 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 ARHGAP24Q8N264 748 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 RBM15BQ8NDT2 890 aaKnown RBP16■□□□□ 0.15
CPSF4-205ENST00000440514 SLC41A3Q96GZ6 507 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 NSL1Q96IY1 281 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 HSH2DQ96JZ2 352 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 CDRT15Q96T59 188 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 KLHL4Q9C0H6 718 aa16■□□□□ 0.15
CPSF4-205ENST00000440514 NOSIPQ9Y314 301 aaKnown RBP16■□□□□ 0.15
CPSF4-205ENST00000440514 B2RBV5 119 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 M0R082 166 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 GPR171O14626 319 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 FZD7O75084 574 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 CALB2P22676 271 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 IFNA8P32881 189 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 NTF4P34130 210 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 UGT2B10P36537 528 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 OR3A2P47893 321 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 TAS2R41P59536 307 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 TLE4Q04727 773 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 SLC17A1Q14916 467 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 BEND4Q6ZU67 534 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 GPAT4Q86UL3 456 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 ZNF417Q8TAU3 575 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 C14orf79Q96F83 325 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 ZNF587Q96SQ5 575 aaPredicted RBP15.99■□□□□ 0.15
CPSF4-205ENST00000440514 PRSS27Q9BQR3 290 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 TMEM43Q9BTV4 400 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 SLC24A3Q9HC58 644 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 C6orf203Q9P0P8 240 aaPredicted RBP15.99■□□□□ 0.15
CPSF4-205ENST00000440514 FLVCR1Q9Y5Y0 555 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 CRYBG3Q68DQ2 2970 aa15.99■□□□□ 0.15
CPSF4-205ENST00000440514 CENPEQ02224 2701 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 SH3D21A4FU49 640 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 LRRN3E7EW58 273 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 KPNA4O00629 521 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-205ENST00000440514 IGHV3-9P01782 118 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 BGLAPP02818 100 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 T-ENOLP0DO92 83 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 HSD17B1P14061 328 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 GRPRP30550 384 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 SSTR2P30874 369 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 MSX2P35548 267 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-205ENST00000440514 LTBQ06643 244 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 FOXD4Q12950 439 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-205ENST00000440514 PIN1Q13526 163 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-205ENST00000440514 IFI44LQ53G44 452 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 SAMD4BQ5PRF9 694 aaKnown RBP15.98■□□□□ 0.15
CPSF4-205ENST00000440514 ANKRD34AQ69YU3 496 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 GLYATQ6IB77 296 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 CASP12Q6UXS9 341 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 LINC00114Q6XXX2 140 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 STAC2Q6ZMT1 411 aa15.98■□□□□ 0.15
CPSF4-205ENST00000440514 RINLQ6ZS11 566 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms