RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 NANOGP1Q8N7R0 232 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 ANKLE1Q8NAG6 615 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 KIAA0895Q8NCT3 520 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 ADAMTS14Q8WXS8 1223 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 HRASLS5Q96KN8 279 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 C6orf50Q9HD87 102 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 TMEFF2Q9UIK5 374 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-206ENST00000441438 PLAGL1Q9UM63 463 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 PSG11Q9UQ72 335 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 MRPS18CQ9Y3D5 142 aaKnown RBP9.88□□□□□ -0.83
SYNE2-206ENST00000441438 MMP24Q9Y5R2 645 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 CFAP20Q9Y6A4 193 aaKnown RBP9.88□□□□□ -0.83
SYNE2-206ENST00000441438 PYCARD-AS1I3L0S3 204 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 SCELO95171 688 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 MTHFD2P13995 350 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 FPR1P21462 350 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 PMPCAQ10713 525 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 PTGR1Q14914 329 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 CALCRLQ16602 461 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 NDUFA9Q16795 377 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 AQP12AQ8IXF9 295 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 NRMQ8IXM6 262 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 FBXO39Q8N4B4 442 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 CDYL2Q8N8U2 506 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 NPAS1Q99742 590 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 FGFBP2Q9BYJ0 223 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 ARMC7Q9H6L4 198 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 ESRP2Q9H6T0 727 aaKnown RBP9.88□□□□□ -0.83
SYNE2-206ENST00000441438 GBA2Q9HCG7 927 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-206ENST00000441438 MYOZ2Q9NPC6 264 aa9.88□□□□□ -0.83
SYNE2-206ENST00000441438 DBR1Q9UK59 544 aaKnown RBP9.88□□□□□ -0.83
SYNE2-206ENST00000441438 TRBV7-9A0A0J9YWB2 115 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 MYMKA6NI61 221 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 ZNF785A8K8V0 405 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 EVPLLA8MZ36 301 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 P2RY10O00398 339 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 KPNA3O00505 521 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-206ENST00000441438 LIASO43766 372 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 SNX3O60493 162 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 IFNGP01579 166 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 TCRBP04435 133 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 CTBP1Q13363 440 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 OR2B11Q5JQS5 317 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 SLC16A14Q7RTX9 510 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 LYG2Q86SG7 212 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 ARHGEF39Q8N4T4 335 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 LRRC57Q8N9N7 239 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 SLC17A8Q8NDX2 589 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 NR4A3Q92570 626 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 KLHL15Q96M94 604 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 SLC38A2Q96QD8 506 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 PTDSS2Q9BVG9 487 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 HRH4Q9H3N8 390 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 NSUN3Q9H649 340 aaKnown RBP9.87□□□□□ -0.83
SYNE2-206ENST00000441438 BCAS3Q9H6U6 928 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 IPPKQ9H8X2 491 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 STOX2Q9P2F5 926 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-206ENST00000441438 S100A8P05109 93 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 CYP11B1P15538 503 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 DNASE1P24855 282 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 OR1D2P34982 312 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 MAP2K4P45985 399 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 SLC6A11P48066 632 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 CD300CQ08708 224 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 FUT7Q11130 342 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 BSXQ3C1V8 233 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 COX19Q49B96 90 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 PAN3Q58A45 887 aaKnown RBP9.87□□□□□ -0.83
SYNE2-206ENST00000441438 SLC26A11Q86WA9 606 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.87□□□□□ -0.83
SYNE2-206ENST00000441438 C4orf33Q8N1A6 199 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 OR5T2Q8NGG2 359 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 STOML3Q8TAV4 291 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 TM4SF19Q96DZ7 209 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 UBL7Q96S82 380 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-206ENST00000441438 PLK3Q9H4B4 646 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 PCIF1Q9H4Z3 704 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 FBXW11Q9UKB1 542 aa9.87□□□□□ -0.83
SYNE2-206ENST00000441438 A0A1W2PPM1 405 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 A8MUI8 341 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 PSMD12O00232 456 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 NRP1O14786 923 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 CYP26A1O43174 497 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 CST4P01036 141 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 FTH1P02794 183 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 CTPS1P17812 591 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 UQCRC2P22695 453 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 ACKR3P25106 362 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 MST1P26927 711 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 OTX1P32242 354 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 RGS6P49758 472 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 SELPLGQ14242 412 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 KHDC1Q4VXA5 237 aaKnown RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 LGSNQ5TDP6 509 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 DHRS7BQ6IAN0 325 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 RGMBQ6NW40 437 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 DHRS4L2Q6PKH6 230 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 BEND7Q8N7W2 519 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 GATSQ8NAP1 163 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 DNERQ8NFT8 737 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms