RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 UBTD2Q8WUN7 234 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 DEPDC1BQ8WUY9 529 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 TFB1MQ8WVM0 346 aaKnown RBP2□□□□□ -2.09
TRAV40-201ENST00000390467 SRSF12Q8WXF0 261 aaKnown RBP2□□□□□ -2.09
TRAV40-201ENST00000390467 HAS2Q92819 552 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 GLYATL1Q969I3 302 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 IL22RA2Q969J5 263 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 SPAG8Q99932 426 aaPredicted RBP2□□□□□ -2.09
TRAV40-201ENST00000390467 DPH7Q9BTV6 452 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 THUMPD3Q9BV44 507 aaKnown RBP2□□□□□ -2.09
TRAV40-201ENST00000390467 HCAR1Q9BXC0 346 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 ELOVL4Q9GZR5 314 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 SLC26A1Q9H2B4 701 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 TMEM206Q9H813 350 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 KCNMB3Q9NPA1 279 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 HPS4Q9NQG7 708 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 ZNF331Q9NQX6 463 aaPredicted RBP2□□□□□ -2.09
TRAV40-201ENST00000390467 DNAJC17Q9NVM6 304 aaKnown RBP2□□□□□ -2.09
TRAV40-201ENST00000390467 VPS18Q9P253 973 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 TEKT2Q9UIF3 430 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 FAM149AA5PLN7 773 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 YJEFN3A6XGL0 299 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 CYB561D2O14569 222 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 SH2D1BO14796 132 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 WDR46O15213 610 aaKnown RBP1.99□□□□□ -2.09
TRAV40-201ENST00000390467 LATO43561 262 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 CAV2P51636 162 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 KRT31Q15323 416 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 ZIC1Q15915 447 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 KYAT1Q16773 422 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 MPPE1Q53F39 396 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 C1QTNF12Q5T7M4 302 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 DDI2Q5TDH0 399 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 MSANTD1Q6ZTZ1 278 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 MOB1BQ7L9L4 216 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 PIWIL3Q7Z3Z3 882 aaKnown RBP1.99□□□□□ -2.09
TRAV40-201ENST00000390467 CCDC83Q8IWF9 413 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 RDH11Q8TC12 318 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 CCDC114Q96M63 670 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 TBX15Q96SF7 602 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 OPN3Q9H1Y3 402 aaPredicted RBP1.99□□□□□ -2.09
TRAV40-201ENST00000390467 CHMP4BQ9H444 224 aaKnown RBP1.99□□□□□ -2.09
TRAV40-201ENST00000390467 DCTPP1Q9H773 170 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 DDX28Q9NUL7 540 aaKnown RBP1.99□□□□□ -2.09
TRAV40-201ENST00000390467 TUBGCP4Q9UGJ1 667 aa1.99□□□□□ -2.09
TRAV40-201ENST00000390467 ARHGAP21Q5T5U3 1957 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 A0A0A6YYC8 382 aaPredicted RBP1.98□□□□□ -2.09
TRAV40-201ENST00000390467 TRIM49D1C9J1S8 452 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 KRTAP4-16G5E9R7 235 aaPredicted RBP1.98□□□□□ -2.09
TRAV40-201ENST00000390467 I3L1I5 382 aaPredicted RBP1.98□□□□□ -2.09
TRAV40-201ENST00000390467 TYROBPO43914 113 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 LCMT2O60294 686 aaKnown RBP1.98□□□□□ -2.09
TRAV40-201ENST00000390467 RANBP6O60518 1105 aaKnown RBP1.98□□□□□ -2.09
TRAV40-201ENST00000390467 LRP3O75074 770 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 PDE5AO76074 875 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 REC8O95072 547 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 CPA3P15088 417 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 SERPINB6P35237 376 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 POU3F4P49335 361 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 UCP2P55851 309 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 LINC00315P59091 139 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 STX1AQ16623 288 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 HKDC1Q2TB90 917 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 ZNF528Q3MIS6 628 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 CCDC158Q5M9N0 1113 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 AGBL2Q5U5Z8 902 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 TFAP2EQ6VUC0 442 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 KRT77Q7Z794 578 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 HOOK3Q86VS8 718 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 TMEM126BQ8IUX1 230 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 TUSC5Q8IXB3 177 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 ERP27Q96DN0 273 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 CPXM1Q96SM3 734 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 FUNDC2Q9BWH2 189 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 TM2D1Q9BX74 207 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 CWC25Q9NXE8 425 aaPredicted RBP1.98□□□□□ -2.09
TRAV40-201ENST00000390467 NOL7Q9UMY1 257 aaKnown RBP1.98□□□□□ -2.09
TRAV40-201ENST00000390467 PDE10AQ9Y233 779 aa1.98□□□□□ -2.09
TRAV40-201ENST00000390467 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.97□□□□□ -2.09
TRAV40-201ENST00000390467 EEF2KO00418 725 aaKnown RBP1.97□□□□□ -2.09
TRAV40-201ENST00000390467 CCNE1P24864 410 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 RPA1P27694 616 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 MAT2AP31153 395 aaKnown RBP1.97□□□□□ -2.09
TRAV40-201ENST00000390467 PPOXP50336 477 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 TSPY1Q01534 308 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 LRRC63Q05C16 580 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 RPS6KA1Q15418 735 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 TRADDQ15628 312 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 CDC37Q16543 378 aaPredicted RBP1.97□□□□□ -2.09
TRAV40-201ENST00000390467 RTL6Q6ICC9 239 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 CDC42EP5Q6NZY7 148 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 CD164L2Q6UWJ8 174 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 GBP6Q6ZN66 633 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 OTUD6BQ8N6M0 293 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 LINC01555Q8NAE3 123 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 RSPH1Q8WYR4 309 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 TEKT1Q969V4 418 aa1.97□□□□□ -2.09
TRAV40-201ENST00000390467 CITED2Q99967 270 aaPredicted RBP1.97□□□□□ -2.09
TRAV40-201ENST00000390467 DDX50Q9BQ39 737 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms