RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TXNDC12O95881 172 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 CHRNGP07510 517 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 C8orf89P0DMQ9 161 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 VDRP11473 427 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 PSMB1P20618 241 aaKnown RBP2.02□□□□□ -2.09
TRAV40-201ENST00000390467 ZP3P21754 424 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 ACP1P24666 158 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 ALDH3B2P48448 385 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 NT5C2P49902 561 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 RPS8P62241 208 aaKnown RBP2.02□□□□□ -2.09
TRAV40-201ENST00000390467 KLF5Q13887 457 aaPredicted RBP2.02□□□□□ -2.09
TRAV40-201ENST00000390467 SGCBQ16585 318 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 NHSL2Q5HYW2 709 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 PAGE2BQ5JRK9 111 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 CASC1Q6TDU7 716 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 STOX1Q6ZVD7 989 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 GET4Q7L5D6 327 aaPredicted RBP2.02□□□□□ -2.09
TRAV40-201ENST00000390467 SIAH3Q8IW03 269 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 MRPL53Q96EL3 112 aaKnown RBP2.02□□□□□ -2.09
TRAV40-201ENST00000390467 C9orf85Q96MD7 179 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 GUCD1Q96NT3 240 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 C19orf43Q9BQ61 176 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 JPH2Q9BR39 696 aaPredicted RBP2.02□□□□□ -2.09
TRAV40-201ENST00000390467 MLPHQ9BV36 600 aaPredicted RBP2.02□□□□□ -2.09
TRAV40-201ENST00000390467 GPR174Q9BXC1 333 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 ESM1Q9NQ30 184 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 TMEM161AQ9NX61 479 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 SEPT10Q9P0V9 454 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 DPM3Q9P2X0 92 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 FBXL5Q9UKA1 691 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 KLK12Q9UKR0 248 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 CDH7Q9ULB5 785 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 DIMT1Q9UNQ2 313 aaKnown RBP2.02□□□□□ -2.09
TRAV40-201ENST00000390467 EXOC7Q9UPT5 735 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 FLVCR1Q9Y5Y0 555 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 OOEPA6NGQ2 149 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 SDR42E2A6NKP2 422 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 TTI1O43156 1089 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 CCDC166P0CW27 439 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 MBL2P11226 248 aaPredicted RBP2.01□□□□□ -2.09
TRAV40-201ENST00000390467 FUT3P21217 361 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 OR3A4PP47883 348 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 VCPP55072 806 aaKnown RBP2.01□□□□□ -2.09
TRAV40-201ENST00000390467 KCNK10P57789 538 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 HAND2P61296 217 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 RPS4XP62701 263 aaKnown RBP2.01□□□□□ -2.09
TRAV40-201ENST00000390467 GIT2Q14161 759 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 EBI3Q14213 229 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 NFE2L1Q14494 772 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 HERPUD1Q15011 391 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 CD226Q15762 336 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 DCAF4L1Q3SXM0 396 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 TCHHL1Q5QJ38 904 aaPredicted RBP2.01□□□□□ -2.09
TRAV40-201ENST00000390467 PET117Q6UWS5 81 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 MFSD7Q6UXD7 560 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 FAM47EQ6ZV65 393 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 LUZP1Q86V48 1076 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 ERI1Q8IV48 349 aaKnown RBP2.01□□□□□ -2.09
TRAV40-201ENST00000390467 LINC00518Q8N0U6 118 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 ZNF433Q8N7K0 673 aaPredicted RBP2.01□□□□□ -2.09
TRAV40-201ENST00000390467 CCDC89Q8N998 374 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 OR7G3Q8NG95 312 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 OR6M1Q8NGM8 313 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 FAM46BQ96A09 425 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 AP2M1Q96CW1 435 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 SLC25A38Q96DW6 304 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 EPSTI1Q96J88 318 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 RSPH9Q9H1X1 276 aaPredicted RBP2.01□□□□□ -2.09
TRAV40-201ENST00000390467 NRN1Q9NPD7 142 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 DNAJB9Q9UBS3 223 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 ARMCX3Q9UH62 379 aaPredicted RBP2.01□□□□□ -2.09
TRAV40-201ENST00000390467 ZNF221Q9UK13 617 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 KCNK6Q9Y257 313 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 MYO10Q9HD67 2058 aa2.01□□□□□ -2.09
TRAV40-201ENST00000390467 KIF7Q2M1P5 1343 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 IGKV6-21A0A0C4DH24 114 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 A0A0U1RQK1 487 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 BICDL2A1A5D9 508 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 RTN2O75298 545 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 SLU7O95391 586 aaKnown RBP2□□□□□ -2.09
TRAV40-201ENST00000390467 HSPA4LO95757 839 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 ALOX5P09917 674 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 PSG2P11465 335 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 UGT1A6P19224 532 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 IGHV1-2P23083 117 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 SAA4P35542 130 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 DEKP35659 375 aaKnown RBP2□□□□□ -2.09
TRAV40-201ENST00000390467 SLC12A3P55017 1021 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 HAGHQ16775 308 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 GLYR1Q49A26 553 aaPredicted RBP2□□□□□ -2.09
TRAV40-201ENST00000390467 CCDC14Q49A88 953 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 EPC2Q52LR7 807 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 TFDP3Q5H9I0 405 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 SPATA46Q5T0L3 261 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 IRGCQ6NXR0 463 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 IL34Q6ZMJ4 242 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 ATAD1Q8NBU5 361 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 RFESDQ8TAC1 157 aa2□□□□□ -2.09
TRAV40-201ENST00000390467 FNDC8Q8TC99 324 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms