RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TSPAN2O60636 221 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 ATP9AO75110 1047 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 GLCEO94923 617 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 CPNE6O95741 557 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 ALPIP09923 528 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 IFNAR1P17181 557 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 FRKP42685 505 aaPredicted RBP2.05□□□□□ -2.08
TRAV40-201ENST00000390467 XCR1P46094 333 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 TFCP2Q12800 502 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 ZNF658Q5TYW1 1059 aaPredicted RBP2.05□□□□□ -2.08
TRAV40-201ENST00000390467 TAF3Q5VWG9 929 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 OTPQ5XKR4 325 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 STEAP1BQ6NZ63 245 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 DCLRE1AQ6PJP8 1040 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 GLRX5Q86SX6 157 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 ASPGQ86U10 573 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 METTL23Q86XA0 190 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 Q8N9L7 120 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 UBLCP1Q8WVY7 318 aaPredicted RBP2.05□□□□□ -2.08
TRAV40-201ENST00000390467 PARK7Q99497 189 aaKnown RBP2.05□□□□□ -2.08
TRAV40-201ENST00000390467 AP1M1Q9BXS5 423 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 ZNF702PQ9H963 129 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 TUFT1Q9NNX1 390 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 GIMAP2Q9UG22 337 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 CIDEBQ9UHD4 219 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 ERVK-19Q9WJR5 959 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 RNF115Q9Y4L5 304 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 ATG4BQ9Y4P1 393 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 TNRQ92752 1358 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 GTF3C1Q12789 2109 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 SLC33A1O00400 549 aaPredicted RBP2.04□□□□□ -2.08
TRAV40-201ENST00000390467 PSMD3O43242 534 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 EMC8O43402 210 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 NUDT14O95848 222 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 SLC16A8O95907 504 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 TPBGLP0DKB5 382 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 CT45A10P0DMU9 189 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 CT45A8P0DMV1 189 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 CT45A9P0DMV2 189 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 B4GALT1P15291 398 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 CASTP20810 708 aaKnown RBP2.04□□□□□ -2.08
TRAV40-201ENST00000390467 IGFBP5P24593 272 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 OR1D4P47884 311 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 SLC34A1Q06495 639 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 SCN1BQ07699 218 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 MSLNQ13421 630 aaPredicted RBP2.04□□□□□ -2.08
TRAV40-201ENST00000390467 PTK6Q13882 451 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 SERTAD2Q14140 314 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 CT45A2Q5DJT8 189 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 RPGRIP1LQ68CZ1 1315 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 NUP93Q8N1F7 819 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 SIX6OS1Q8N1H7 587 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 THEM5Q8N1Q8 247 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 CCDC26Q8TAB7 109 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 FAM162AQ96A26 154 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 CDKN2AIPNLQ96HQ2 116 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 COG3Q96JB2 828 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 CXorf58Q96LI9 332 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 PLEKHF1Q96S99 279 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 C19orf24Q9BVV8 132 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 TRIM9Q9C026 710 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 SLC2A6Q9UGQ3 507 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 CCPG1Q9ULG6 757 aa2.04□□□□□ -2.08
TRAV40-201ENST00000390467 FGD5Q6ZNL6 1462 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 A0A0A6YYD4 124 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 TCP11X1B4DZS4 312 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 G3V3Y1 287 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 PDXKO00764 312 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 RAD51DO75771 328 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 SERF1AO75920 110 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 GH1P01241 217 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 IGHV3-23P01764 117 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 FCER2P06734 321 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 HSP90AA1P07900 732 aaKnown RBP2.03□□□□□ -2.08
TRAV40-201ENST00000390467 SLC7A2P52569 658 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 DIO3P55073 304 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 ZNF85Q03923 595 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 IL17AQ16552 155 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 CCDC184Q52MB2 194 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 SBK1Q52WX2 424 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 LRRC38Q5VT99 294 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 SHQ1Q6PI26 577 aaKnown RBP2.03□□□□□ -2.08
TRAV40-201ENST00000390467 GPR142Q7Z601 462 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 MKXQ8IYA7 352 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 RNF175Q8N4F7 328 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 OR4L1Q8NH43 312 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 PANX3Q96QZ0 392 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 TSPAN18Q96SJ8 248 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 FAM173AQ9BQD7 235 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 NTMT1Q9BV86 223 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 EDEM3Q9BZQ6 932 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 CENPMQ9NSP4 180 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 MRTO4Q9UKD2 239 aaKnown RBP2.03□□□□□ -2.08
TRAV40-201ENST00000390467 EMCNQ9ULC0 261 aa2.03□□□□□ -2.08
TRAV40-201ENST00000390467 RPH3AQ9Y2J0 694 aaPredicted RBP2.03□□□□□ -2.08
TRAV40-201ENST00000390467 ARHGAP23Q9P227 1491 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 AFF2P51816 1311 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 SLC17A2O00624 439 aa2.02□□□□□ -2.09
TRAV40-201ENST00000390467 TIMM44O43615 452 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms