RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 GOLGA5Q8TBA6 731 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 SETD7Q8WTS6 366 aaKnown RBP2.09□□□□□ -2.07
TRAV40-201ENST00000390467 RNF138Q8WVD3 245 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 ERO1AQ96HE7 468 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 OR5M11Q96RB7 305 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 S1PR3Q99500 378 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 ZNF184Q99676 751 aaPredicted RBP2.09□□□□□ -2.07
TRAV40-201ENST00000390467 EBF4Q9BQW3 602 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 SRD5A3Q9H8P0 318 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 MIEF1Q9NQG6 463 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 CA5BQ9Y2D0 317 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 MTF2Q9Y483 593 aaPredicted RBP2.09□□□□□ -2.07
TRAV40-201ENST00000390467 PINLYPA6NC86 204 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 DKC1O60832 514 aaKnown RBP eCLIP2.08□□□□□ -2.08
TRAV40-201ENST00000390467 IGLV1-47P01700 117 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 HSPB1P04792 205 aaKnown RBP2.08□□□□□ -2.08
TRAV40-201ENST00000390467 SOAT1P35610 550 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 TRPC1P48995 793 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 ZNF658BQ4V348 819 aaPredicted RBP2.08□□□□□ -2.08
TRAV40-201ENST00000390467 Q6P435 159 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 MOB2Q70IA6 237 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 UNC5CLQ8IV45 518 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 THNSL1Q8IYQ7 743 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 SNRNP27Q8WVK2 155 aaKnown RBP2.08□□□□□ -2.08
TRAV40-201ENST00000390467 ELSPBP1Q96BH3 223 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 BIRC7Q96CA5 298 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 C16orf74Q96GX8 76 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 CAPNS2Q96L46 248 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 KIR2DL4Q99706 377 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 GDF3Q9NR23 364 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 DNAJC11Q9NVH1 559 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 RAI14Q9P0K7 980 aa2.08□□□□□ -2.08
TRAV40-201ENST00000390467 CFDP1Q9UEE9 299 aaPredicted RBP2.08□□□□□ -2.08
TRAV40-201ENST00000390467 MEI4A8MW99 385 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 K7ERI5 159 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 ASNSP08243 561 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 WNT2P09544 360 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 ZNF853P0CG23 659 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 TRIM23P36406 574 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 TNFSF10P50591 281 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 ARHGDIBP52566 201 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 MECOMQ03112 1051 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 OVGP1Q12889 678 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 HEPACAMQ14CZ8 416 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 MS4A13Q5J8X5 152 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 C1orf189Q5VU69 101 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 RHBDD2Q6NTF9 364 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 APOOLQ6UXV4 268 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 KLHDC8AQ8IYD2 350 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 NHLRC2Q8NBF2 726 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 FBXO25Q8TCJ0 367 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 MR1Q95460 341 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 BAG1Q99933 345 aaPredicted RBP2.07□□□□□ -2.08
TRAV40-201ENST00000390467 APOBEC3BQ9UH17 382 aaKnown RBP2.07□□□□□ -2.08
TRAV40-201ENST00000390467 SWAP70Q9UH65 585 aa2.07□□□□□ -2.08
TRAV40-201ENST00000390467 NAP1L2Q9ULW6 460 aaPredicted RBP2.07□□□□□ -2.08
TRAV40-201ENST00000390467 RAI1Q7Z5J4 1906 aaPredicted RBP2.07□□□□□ -2.08
TRAV40-201ENST00000390467 CDC42BPBQ9Y5S2 1711 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 H7C0S8 307 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 IFIT3O14879 490 aaKnown RBP2.06□□□□□ -2.08
TRAV40-201ENST00000390467 NUDT21O43809 227 aaKnown RBP2.06□□□□□ -2.08
TRAV40-201ENST00000390467 STBD1O95210 358 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 SLC2A10O95528 541 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 OAS1P00973 400 aaKnown RBP2.06□□□□□ -2.08
TRAV40-201ENST00000390467 EPOP01588 193 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 APOA4P06727 396 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 GSTA2P09210 222 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 SNRPCP09234 159 aaKnown RBP2.06□□□□□ -2.08
TRAV40-201ENST00000390467 NUDT17P0C025 328 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 NR2C1P13056 603 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 PVRP15151 417 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 CALRP27797 417 aaKnown RBP2.06□□□□□ -2.08
TRAV40-201ENST00000390467 PTPN4P29074 926 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 COPB2P35606 906 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 P2RY4P51582 365 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 ZNF131P52739 623 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 KRTAP10-10P60014 251 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 GABPAQ06546 454 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 ZNF33BQ06732 778 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 ARHGAP1Q07960 439 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 CD47Q08722 323 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 HSPA14Q0VDF9 509 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 SLC22A10Q63ZE4 541 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 SCARA5Q6ZMJ2 495 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 KLHL7Q8IXQ5 586 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 C14orf178Q8N769 122 aaPredicted RBP2.06□□□□□ -2.08
TRAV40-201ENST00000390467 NFAM1Q8NET5 270 aaPredicted RBP2.06□□□□□ -2.08
TRAV40-201ENST00000390467 GGHQ92820 318 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 ULK4Q96C45 1275 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 GBP5Q96PP8 586 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 PRAM1Q96QH2 718 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 SERINC2Q96SA4 455 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 NMUR2Q9GZQ4 415 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 ZDHHC6Q9H6R6 413 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 NRBP1Q9UHY1 535 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 NEU3Q9UQ49 428 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 ZFP37Q9Y6Q3 630 aaPredicted RBP2.06□□□□□ -2.08
TRAV40-201ENST00000390467 CLSPNQ9HAW4 1339 aa2.06□□□□□ -2.08
TRAV40-201ENST00000390467 IGLV8-61A0A075B6I0 122 aa2.05□□□□□ -2.08
TRAV40-201ENST00000390467 MFSD2BA6NFX1 497 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms