RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SPHARQ15513 63 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 MICAQ29983 383 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 QRICH1Q2TAL8 776 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 SEL1L2Q5TEA6 688 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 CASC4Q6P4E1 433 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 Q6ZRG5 221 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 CYP4V2Q6ZWL3 525 aaPredicted RBP2.12□□□□□ -2.07
TRAV40-201ENST00000390467 CORO2AQ92828 525 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 RAB3IPQ96QF0 476 aaPredicted RBP2.12□□□□□ -2.07
TRAV40-201ENST00000390467 SSX3Q99909 188 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 NUSAP1Q9BXS6 441 aaKnown RBP2.12□□□□□ -2.07
TRAV40-201ENST00000390467 LRRC2Q9BYS8 371 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 ELL3Q9HB65 397 aaPredicted RBP2.12□□□□□ -2.07
TRAV40-201ENST00000390467 TIGARQ9NQ88 270 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 SENP1Q9P0U3 644 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 PSORS1C1Q9UIG5 152 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 CHD4Q14839 1912 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 MEGF6O75095 1541 aa2.12□□□□□ -2.07
TRAV40-201ENST00000390467 A0A087X0K7 114 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 NME6O75414 186 aaPredicted RBP2.11□□□□□ -2.07
TRAV40-201ENST00000390467 MDKP21741 143 aaPredicted RBP2.11□□□□□ -2.07
TRAV40-201ENST00000390467 CALML3P27482 149 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 HNRNPA3P51991 378 aaKnown RBP2.11□□□□□ -2.07
TRAV40-201ENST00000390467 GNB2P62879 340 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 TWISTNBQ3B726 338 aaPredicted RBP2.11□□□□□ -2.07
TRAV40-201ENST00000390467 CELF3Q5SZQ8 465 aaKnown RBP2.11□□□□□ -2.07
TRAV40-201ENST00000390467 SNRNP48Q6IEG0 339 aaKnown RBP2.11□□□□□ -2.07
TRAV40-201ENST00000390467 CAVIN1Q6NZI2 390 aaKnown RBP2.11□□□□□ -2.07
TRAV40-201ENST00000390467 C17orf64Q86WR6 236 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 C4orf19Q8IY42 314 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 ZNF444Q8N0Y2 327 aaPredicted RBP2.11□□□□□ -2.07
TRAV40-201ENST00000390467 RELL2Q8NC24 303 aaPredicted RBP2.11□□□□□ -2.07
TRAV40-201ENST00000390467 OR13F1Q8NGS4 319 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 PRCCQ92733 491 aaPredicted RBP2.11□□□□□ -2.07
TRAV40-201ENST00000390467 SLCO4A1Q96BD0 722 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 FAM122AQ96E09 287 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 AGPAT1Q99943 283 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 IDI2Q9BXS1 227 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 CUEDC2Q9H467 287 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 Q9HAA7 133 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 SEC14L4Q9UDX3 406 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 ACEP12821 1306 aa2.11□□□□□ -2.07
TRAV40-201ENST00000390467 TRAV34A0A0B4J273 112 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 MAGEB16A2A368 324 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 TRABD2BA6NFA1 517 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 SLC15A5A6NIM6 579 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 A8MX80 341 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 RSPH10B2B2RC85 870 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 B4DXG7 233 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 CCER2I3L3R5 266 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 APBB3O95704 486 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 ACTL6AO96019 429 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 RSPH10BP0C881 870 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 TSPY3P0CV98 308 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 TSPY8P0CW00 308 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 MAGEB1P43366 347 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 EFNA3P52797 238 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 WNT4P56705 351 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 NUCB1Q02818 461 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 P2RY14Q15391 338 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 ACKR1Q16570 336 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 TIFABQ6ZNK6 161 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 PRSS48Q7RTY5 328 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 APOBEC3FQ8IUX4 373 aaKnown RBP2.1□□□□□ -2.07
TRAV40-201ENST00000390467 OR8H2Q8N162 312 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 Q8N9G6 341 aaPredicted RBP2.1□□□□□ -2.07
TRAV40-201ENST00000390467 TRPV3Q8NET8 790 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 SETD6Q8TBK2 473 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 AFAP1L1Q8TED9 768 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 IMMP1LQ96LU5 166 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 ACPTQ9BZG2 426 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 RNF41Q9H4P4 317 aaPredicted RBP2.1□□□□□ -2.07
TRAV40-201ENST00000390467 SLC25A19Q9HC21 320 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 MIS18AQ9NYP9 233 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 TECRQ9NZ01 308 aaKnown RBP2.1□□□□□ -2.07
TRAV40-201ENST00000390467 KLHL21Q9UJP4 597 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 POMT1Q9Y6A1 747 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 LRRK1Q38SD2 2015 aa2.1□□□□□ -2.07
TRAV40-201ENST00000390467 ZNFX1Q9P2E3 1918 aaKnown RBP2.09□□□□□ -2.07
TRAV40-201ENST00000390467 SLC30A4O14863 429 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 FIBPO43427 364 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 GOT2P00505 430 aaKnown RBP2.09□□□□□ -2.07
TRAV40-201ENST00000390467 PTMAP06454 111 aaKnown RBP2.09□□□□□ -2.07
TRAV40-201ENST00000390467 MMP10P09238 476 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 IDSP22304 550 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 BDNFP23560 247 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 UCP1P25874 307 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 GP5P40197 560 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 TKTL1P51854 596 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 RIPPLY3P57055 190 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 PSG7Q13046 419 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 ASAH1Q13510 395 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 OR1C1Q15619 314 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 MPP7Q5T2T1 576 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 TATDN1Q6P1N9 297 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 ZCCHC12Q6PEW1 402 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 ADAMTSL5Q6ZMM2 481 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 TGIF2LYQ8IUE0 185 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 GPR65Q8IYL9 337 aa2.09□□□□□ -2.07
TRAV40-201ENST00000390467 ENTHD1Q8IYW4 607 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms