RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 XKR8Q9H6D3 395 aa19.28■□□□□ 0.68
PDZD3-201ENST00000322712 PHPT1Q9NRX4 125 aaPredicted RBP19.28■□□□□ 0.68
PDZD3-201ENST00000322712 SH3BP4Q9P0V3 963 aa19.28■□□□□ 0.68
PDZD3-201ENST00000322712 COLQQ9Y215 455 aaPredicted RBP19.28■□□□□ 0.68
PDZD3-201ENST00000322712 COMMD3-BMI1R4GMX3 469 aa19.28■□□□□ 0.68
PDZD3-201ENST00000322712 PRMT3O60678 531 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 SMIM18P0DKX4 95 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 RAP2AP10114 183 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 IDSP22304 550 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 LAPTM5Q13571 262 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 HIST2H2ACQ16777 129 aaPredicted RBP19.27■□□□□ 0.68
PDZD3-201ENST00000322712 ZNF385BQ569K4 471 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 HIST2H2AA3Q6FI13 130 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 TMIGD1Q6UXZ0 262 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 FAM129CQ86XR2 697 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 LINC01555Q8NAE3 123 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 OR4K1Q8NGD4 311 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 DNAJB8Q8NHS0 232 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 C12orf66Q96MD2 445 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 SOX17Q9H6I2 414 aaPredicted RBP19.27■□□□□ 0.68
PDZD3-201ENST00000322712 CD207Q9UJ71 328 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 CA5BQ9Y2D0 317 aa19.27■□□□□ 0.68
PDZD3-201ENST00000322712 FEZF1A0PJY2 475 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 OR52A4PA6NMU1 304 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 FAM220BPB1ANY3 271 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 UPK1AO00322 258 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 FOXE1O00358 373 aaPredicted RBP19.27■□□□□ 0.67
PDZD3-201ENST00000322712 CLOCKO15516 846 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 SERPINA1P01009 418 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 KLK1P06870 262 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 ZNF23P17027 643 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 DPY19L1Q2PZI1 675 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 FAM98BQ52LJ0 330 aaKnown RBP19.27■□□□□ 0.67
PDZD3-201ENST00000322712 OTUD3Q5T2D3 398 aaPredicted RBP19.27■□□□□ 0.67
PDZD3-201ENST00000322712 SDE2Q6IQ49 451 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 SPRED1Q7Z699 444 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 CARM1Q86X55 608 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 MMP21Q8N119 569 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 MAGEE2Q8TD90 523 aaPredicted RBP19.27■□□□□ 0.67
PDZD3-201ENST00000322712 FERD3LQ96RJ6 166 aa19.27■□□□□ 0.67
PDZD3-201ENST00000322712 IMP3Q9NV31 184 aaKnown RBP19.27■□□□□ 0.67
PDZD3-201ENST00000322712 ANHXE9PGG2 379 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 RASAL1O95294 804 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 CLIC3O95833 236 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 TBX6O95947 436 aaPredicted RBP19.26■□□□□ 0.67
PDZD3-201ENST00000322712 ABCB1P08183 1280 aaPredicted RBP19.26■□□□□ 0.67
PDZD3-201ENST00000322712 CLDN2P57739 230 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 CHRNB3Q05901 458 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 PPP1R8Q12972 351 aaKnown RBP19.26■□□□□ 0.67
PDZD3-201ENST00000322712 COL19A1Q14993 1142 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 CLCA4Q14CN2 919 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 ZCCHC8Q6NZY4 707 aaKnown RBP19.26■□□□□ 0.67
PDZD3-201ENST00000322712 FAM180BQ6P0A1 224 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 LCTLQ6UWM7 567 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 FAM20CQ8IXL6 584 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 SETD7Q8WTS6 366 aaKnown RBP19.26■□□□□ 0.67
PDZD3-201ENST00000322712 TFAP2CQ92754 450 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 PRPF18Q99633 342 aaKnown RBP19.26■□□□□ 0.67
PDZD3-201ENST00000322712 C9orf16Q9BUW7 83 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 TRIT1Q9H3H1 467 aaKnown RBP19.26■□□□□ 0.67
PDZD3-201ENST00000322712 FAM120CQ9NX05 1096 aaKnown RBP19.26■□□□□ 0.67
PDZD3-201ENST00000322712 GPSM3Q9Y4H4 160 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 PLXND1Q9Y4D7 1925 aa19.26■□□□□ 0.67
PDZD3-201ENST00000322712 SMIM31A0A1B0GVY4 71 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 A0A1W2PPV9 198 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 H7BY64 318 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 FAM58BPP0C7Q3 252 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 ERGP11308 486 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 ETS2P15036 469 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 TRPC1P48995 793 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 CASP9P55211 416 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 C21orf58P58505 322 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 TFF2Q03403 129 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 PRSS53Q2L4Q9 553 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 TMTC4Q5T4D3 741 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 GALNT18Q6P9A2 607 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 SATL1Q86VE3 508 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 TNIP2Q8NFZ5 429 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.25■□□□□ 0.67
PDZD3-201ENST00000322712 SNX19Q92543 992 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 SLC47A1Q96FL8 570 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 REXO5Q96IC2 774 aaKnown RBP19.25■□□□□ 0.67
PDZD3-201ENST00000322712 PRAP1Q96NZ9 151 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 CAAP1Q9H8G2 361 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 DCAF13Q9NV06 445 aaKnown RBP19.25■□□□□ 0.67
PDZD3-201ENST00000322712 PIAS3Q9Y6X2 628 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 HEATR5BQ9P2D3 2071 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 POM121BA6NF01 834 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 H0Y8X5 98 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 SCELO95171 688 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 POU3F3P20264 500 aaPredicted RBP19.25■□□□□ 0.67
PDZD3-201ENST00000322712 TXNL4AP83876 142 aaKnown RBP19.25■□□□□ 0.67
PDZD3-201ENST00000322712 ZNF763Q0D2J5 394 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 ABHD18Q0P651 414 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 GAB1Q13480 694 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 CCDC85BQ15834 202 aaPredicted RBP19.25■□□□□ 0.67
PDZD3-201ENST00000322712 MSANTD1Q6ZTZ1 278 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 ANKRD53Q8N9V6 530 aa19.25■□□□□ 0.67
PDZD3-201ENST00000322712 CIDECQ96AQ7 238 aaPredicted RBP19.25■□□□□ 0.67
PDZD3-201ENST00000322712 METTL2AQ96IZ6 378 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms