Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 RNY1P11-201ENST00000363759 113 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 RNU4-84P-201ENST00000364200 139 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 SNORA1.1-201ENST00000364671 133 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 RNU6-818P-201ENST00000364837 108 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 RNU6-42P-201ENST00000384165 107 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 RNU6-886P-201ENST00000384319 105 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 MIR548I1-201ENST00000408810 149 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 RNU6-182P-201ENST00000516970 105 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 MIR4431-201ENST00000579990 94 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 AC020891.4-201ENST00000605745 93 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 AC098479.1-201ENST00000609225 154 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 MIR6788-201ENST00000618842 66 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 MIR3658-201ENST00000636291 56 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 AC010332.2-201ENST00000613083 1904 ntBASIC0.66□□□□□ -2.3
KRT39Q6A163 RNU6-312P-201ENST00000364629 107 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 RNU6-1130P-201ENST00000365434 107 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 Y_RNA.441-201ENST00000384123 112 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 Y_RNA.555-201ENST00000384673 110 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 RNU6-768P-201ENST00000384683 107 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 MIR520F-201ENST00000384824 87 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 MIR573-201ENST00000384964 99 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 MIR518E-201ENST00000385252 88 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 RNU6-1135P-201ENST00000411083 103 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 Y_RNA.662-201ENST00000516028 97 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 MIR378D2-201ENST00000580636 98 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 MIR3129-201ENST00000581095 76 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 MIR4804-201ENST00000581683 73 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 MIR5197-201ENST00000583721 112 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 MIR151B-201ENST00000584249 96 ntBASIC0.65□□□□□ -2.31
KRT39Q6A163 RNU6-1082P-201ENST00000364574 107 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 Y_RNA.272-201ENST00000364696 102 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 RNY1P8-201ENST00000383970 114 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 RNU6-804P-201ENST00000384286 107 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 MIR520H-201ENST00000385126 88 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 SNORA26.6-201ENST00000391256 115 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.64□□□□□ -2.31
KRT39Q6A163 AC107027.2-201ENST00000512197 115 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 RNU6-977P-201ENST00000516411 103 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 RNU7-121P-201ENST00000516604 62 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 MTND5P41-201ENST00000517498 206 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.64□□□□□ -2.31
KRT39Q6A163 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 MIR4676-201ENST00000583078 72 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 AL365205.2-201ENST00000594586 68 ntBASIC0.64□□□□□ -2.31
KRT39Q6A163 Y_RNA.180-201ENST00000363867 113 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 Y_RNA.270-201ENST00000364693 104 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 Y_RNA.542-201ENST00000384641 111 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 MIR588-201ENST00000384900 83 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 MIR563-201ENST00000385080 79 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 RNU6-239P-201ENST00000390990 99 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 SNORA79-201ENST00000408376 140 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 RNU6-1165P-201ENST00000410119 107 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 RNU6-394P-201ENST00000410735 107 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 snoU13.2-201ENST00000459201 104 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 SNORD116-25-201ENST00000516517 92 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 MIR7111-201ENST00000619751 72 ntBASIC0.63□□□□□ -2.31
KRT39Q6A163 MIR342-201ENST00000362212 99 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 RNU6-597P-201ENST00000365620 102 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 Y_RNA.393-201ENST00000383936 102 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 Y_RNA.398-201ENST00000383952 99 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 RNU6-209P-201ENST00000384118 107 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
KRT39Q6A163 RNA5SP222-201ENST00000411039 105 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 RNU6-177P-201ENST00000411257 104 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 RNU6-255P-201ENST00000516957 105 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 AC021753.1-201ENST00000635724 168 ntBASIC0.62□□□□□ -2.31
KRT39Q6A163 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
KRT39Q6A163 MTND5P32-201ENST00000560711 1802 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 Y_RNA.8-201ENST00000362353 102 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 Y_RNA.170-201ENST00000363746 110 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 RNU6-1292P-201ENST00000383856 107 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 SNORD116-18-201ENST00000383961 92 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 Y_RNA.521-201ENST00000384560 114 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 MIR624-201ENST00000385217 97 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 SNORD12C-201ENST00000386307 89 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 MIR18B-201ENST00000454574 71 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 RNU7-45P-201ENST00000459460 63 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 snoU13.18-201ENST00000459483 104 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 RNA5SP436-201ENST00000516020 115 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 SCARNA15-202ENST00000516881 127 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 RNU6-1212P-201ENST00000517023 104 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 RNU2-60P-201ENST00000517290 128 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 MIR3144-201ENST00000579460 79 ntBASIC0.61□□□□□ -2.31
KRT39Q6A163 Y_RNA.52-201ENST00000362760 96 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 RNU4-11P-201ENST00000365287 132 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 Y_RNA.337-201ENST00000365312 102 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 Y_RNA.357-201ENST00000365487 109 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 Y_RNA.580-201ENST00000391004 95 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 RNU6-588P-201ENST00000410281 105 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 RNA5SP127-201ENST00000411051 133 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.6□□□□□ -2.31
KRT39Q6A163 RNU7-56P-201ENST00000458744 62 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 RNU7-197P-201ENST00000458836 62 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 RNA5SP236-201ENST00000516169 116 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms