Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 Z83818.1-201ENST00000603584 150 ntBASIC0.73□□□□□ -2.29
KRT39Q6A163 MIR8055-201ENST00000610739 97 ntBASIC0.73□□□□□ -2.29
KRT39Q6A163 AL136317.1-201ENST00000612653 226 ntBASIC0.73□□□□□ -2.29
KRT39Q6A163 Z97988.1-201ENST00000637697 135 ntBASIC0.73□□□□□ -2.29
KRT39Q6A163 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRT39Q6A163 Y_RNA.7-201ENST00000362352 102 ntBASIC0.72□□□□□ -2.29
KRT39Q6A163 RNU6-1020P-201ENST00000363684 107 ntBASIC0.72□□□□□ -2.29
KRT39Q6A163 RNU6-682P-201ENST00000363843 106 ntBASIC0.72□□□□□ -2.29
KRT39Q6A163 Y_RNA.233-201ENST00000364407 101 ntBASIC0.72□□□□□ -2.29
KRT39Q6A163 Y_RNA.785-201ENST00000384290 109 ntBASIC0.72□□□□□ -2.29
KRT39Q6A163 SNORD105-201ENST00000386910 85 ntBASIC0.72□□□□□ -2.29
KRT39Q6A163 SNORD83.1-201ENST00000411362 77 ntBASIC0.72□□□□□ -2.29
KRT39Q6A163 AC244098.3-201ENST00000424803 96 ntBASIC0.72□□□□□ -2.29
KRT39Q6A163 SNORA81.3-201ENST00000517283 198 ntBASIC0.72□□□□□ -2.29
KRT39Q6A163 U6.106-201ENST00000636360 105 ntBASIC0.72□□□□□ -2.29
KRT39Q6A163 MIR1-1-201ENST00000362147 71 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 Y_RNA.23-201ENST00000362496 106 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 Y_RNA.182-201ENST00000363880 111 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
KRT39Q6A163 RNU6-578P-201ENST00000390980 103 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 RNU6-1228P-201ENST00000391014 107 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 PCNPP3-201ENST00000393579 471 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 RNU6-1190P-201ENST00000410811 104 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 RNU5E-9P-201ENST00000411164 104 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 Y_RNA.793-201ENST00000411222 111 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 AC015818.7-201ENST00000428754 109 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 AC087499.7-201ENST00000441958 109 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 RNU7-120P-201ENST00000459334 63 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 AC074198.2-201ENST00000508153 258 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 RNU7-53P-201ENST00000516705 60 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 RNU6-861P-201ENST00000516745 106 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 AP002392.1-201ENST00000537692 208 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 MIR4744-201ENST00000581563 82 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 AC004792.1-201ENST00000614523 137 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 MIR6740-201ENST00000618268 113 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.71□□□□□ -2.3
KRT39Q6A163 MIR376A2-201ENST00000636782 80 ntBASIC0.71□□□□□ -2.3
KRT39Q6A163 Y_RNA.29-201ENST00000362570 113 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 Y_RNA.75-201ENST00000362927 97 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 Y_RNA.121-201ENST00000363309 113 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 RNU6-103P-201ENST00000363686 107 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 RNU6-275P-201ENST00000364910 107 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 SNORA1-201ENST00000384107 130 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 Y_RNA.440-201ENST00000384120 114 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 RNU6-110P-201ENST00000384508 104 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 RNU4-70P-201ENST00000384579 139 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 MT-TR-201ENST00000387439 65 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 AL138752.1-201ENST00000452964 351 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 RNU7-62P-201ENST00000458856 62 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 RNU7-96P-201ENST00000459535 64 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 RNU6-998P-201ENST00000515894 101 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 Y_RNA.700-201ENST00000516806 100 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 RMST_2.1-201ENST00000617263 136 ntBASIC0.7□□□□□ -2.3
KRT39Q6A163 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
KRT39Q6A163 Y_RNA.116-201ENST00000363292 103 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 Y_RNA.150-201ENST00000363562 102 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 Y_RNA.410-201ENST00000383992 113 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
KRT39Q6A163 SNORD77.3-201ENST00000391113 65 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 RNU4-43P-201ENST00000410628 137 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 Y_RNA.797-201ENST00000515977 94 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 MRPS18CP4-201ENST00000535821 231 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.69□□□□□ -2.3
KRT39Q6A163 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 MIR4771-2-201ENST00000577758 74 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 AC011195.1-201ENST00000578177 177 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 MIR4771-1-201ENST00000582617 74 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 AC072026.1-201ENST00000605023 201 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 FTX_2.1-201ENST00000618816 94 ntBASIC0.69□□□□□ -2.3
KRT39Q6A163 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.68□□□□□ -2.3
KRT39Q6A163 RNU6-978P-201ENST00000364371 103 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 Y_RNA.240-201ENST00000364469 95 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 RNU6-934P-201ENST00000365154 107 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 Y_RNA.355-201ENST00000365462 98 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 RNU6-1189P-201ENST00000383958 107 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 RNU6-643P-201ENST00000384018 107 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 Y_RNA.508-201ENST00000384502 114 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 MIR548I3-201ENST00000408378 149 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 MIR548J-201ENST00000408833 112 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 RNU6-602P-201ENST00000411155 105 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 SEPT7P4-201ENST00000437076 306 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 AL121914.1-201ENST00000450188 156 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 RNU2-11P-201ENST00000459191 187 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 RNA5SP220-201ENST00000516298 104 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 AC004812.1-201ENST00000540773 146 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 MIR3668-201ENST00000582138 75 ntBASIC0.68□□□□□ -2.3
KRT39Q6A163 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
KRT39Q6A163 RNU6-728P-201ENST00000365375 104 ntBASIC0.67□□□□□ -2.3
KRT39Q6A163 RNU6-1336P-201ENST00000383886 109 ntBASIC0.67□□□□□ -2.3
KRT39Q6A163 SNORD38B-201ENST00000384690 67 ntBASIC0.67□□□□□ -2.3
KRT39Q6A163 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.67□□□□□ -2.3
KRT39Q6A163 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
KRT39Q6A163 SNORA4-201ENST00000584302 138 ntBASIC0.67□□□□□ -2.3
KRT39Q6A163 SNORD38B-202ENST00000625943 69 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 224.4 ms