Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 MIR410-201ENST00000362222 80 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 RNU6-1240P-201ENST00000365155 104 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 RNU1-115P-201ENST00000365329 160 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 XGY1-201ENST00000381172 446 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 RNU6-1264P-201ENST00000383891 107 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 Y_RNA.395-201ENST00000383945 109 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 AC244636.1-201ENST00000421152 228 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.81□□□□□ -2.12
XRCC3O43542 CHEK2P4-201ENST00000450340 246 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 SNORA40.9-201ENST00000515895 93 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 RNU6-107P-201ENST00000516643 102 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 RNA5SP364-201ENST00000516938 78 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.81□□□□□ -2.12
XRCC3O43542 AC018448.1-201ENST00000552843 316 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.81□□□□□ -2.12
XRCC3O43542 MIR4299-201ENST00000577899 72 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 VN1R91P-201ENST00000594377 169 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 uc_338.20-201ENST00000621563 178 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 AC006001.4-201ENST00000622243 395 ntBASIC1.81□□□□□ -2.12
XRCC3O43542 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
XRCC3O43542 snoU2-30.2-201ENST00000362805 70 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 RNU6-797P-201ENST00000363101 109 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 Y_RNA.112-201ENST00000363250 102 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 SNORD42.2-201ENST00000365570 69 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 Y_RNA.419-201ENST00000384041 102 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 Y_RNA.535-201ENST00000384612 99 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 MIR504-201ENST00000385065 83 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 SNORA11.4-201ENST00000408823 129 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 RNA5SP100-201ENST00000410903 110 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 RNA5SP59-201ENST00000410922 110 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 AC009310.1-201ENST00000414414 451 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 CST2P1-201ENST00000425770 87 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 HMGN2P34-201ENST00000437647 269 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.8□□□□□ -2.12
XRCC3O43542 SCARNA16.3-201ENST00000516595 184 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.8□□□□□ -2.12
XRCC3O43542 MIR5094-201ENST00000578766 85 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 MIR4524B-201ENST00000581569 115 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 MIR4272-201ENST00000635924 64 ntBASIC1.8□□□□□ -2.12
XRCC3O43542 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
XRCC3O43542 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
XRCC3O43542 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
XRCC3O43542 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
XRCC3O43542 RNU1-96P-201ENST00000364163 162 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 Y_RNA.460-201ENST00000384255 102 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 Y_RNA.498-201ENST00000384460 102 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 U3.40-201ENST00000408706 208 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 AC096644.2-201ENST00000429278 159 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 AL137792.2-201ENST00000443484 235 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 RPL23AP6-201ENST00000446637 472 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 Y_RNA.639-201ENST00000458981 102 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 RNU6-625P-201ENST00000459412 107 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 Y_RNA.661-201ENST00000516003 99 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.79□□□□□ -2.12
XRCC3O43542 AC022254.1-201ENST00000567857 235 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 AC092447.9-201ENST00000603395 144 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 AC010900.2-201ENST00000604508 210 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 AL627230.6-201ENST00000611129 280 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 uc_338.22-201ENST00000622722 187 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 AL160413.1-201ENST00000622780 310 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 CTSLP2-204ENST00000629029 392 ntBASIC1.79□□□□□ -2.12
XRCC3O43542 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.79□□□□□ -2.12
XRCC3O43542 Y_RNA.27-201ENST00000362540 103 ntBASIC1.78□□□□□ -2.12
XRCC3O43542 RNU6-112P-201ENST00000363599 104 ntBASIC1.78□□□□□ -2.12
XRCC3O43542 Y_RNA.287-201ENST00000364853 94 ntBASIC1.78□□□□□ -2.12
XRCC3O43542 MIR628-201ENST00000385229 95 ntBASIC1.78□□□□□ -2.12
XRCC3O43542 MIR1253-201ENST00000408273 105 ntBASIC1.78□□□□□ -2.12
XRCC3O43542 RNU2-40P-201ENST00000410833 196 ntBASIC1.78□□□□□ -2.12
XRCC3O43542 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.78□□□□□ -2.12
XRCC3O43542 RNU6-1012P-201ENST00000516606 109 ntBASIC1.78□□□□□ -2.12
XRCC3O43542 RNU4-77P-201ENST00000516692 156 ntBASIC1.78□□□□□ -2.12
XRCC3O43542 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
XRCC3O43542 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.78□□□□□ -2.12
XRCC3O43542 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
XRCC3O43542 AC069114.2-201ENST00000604699 304 ntBASIC1.78□□□□□ -2.12
XRCC3O43542 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.78□□□□□ -2.12
XRCC3O43542 AC090574.1-201ENST00000623186 233 ntBASIC1.78□□□□□ -2.12
XRCC3O43542 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.78□□□□□ -2.12
XRCC3O43542 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
XRCC3O43542 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
XRCC3O43542 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
XRCC3O43542 AC006026.1-201ENST00000444025 1803 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 ZNF658B-202ENST00000615961 3375 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 RNA5SP289-201ENST00000362332 137 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 RNU6-1019P-201ENST00000364424 107 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 RNU6-417P-201ENST00000384712 107 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 MIR515-2-201ENST00000384883 83 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 MIR515-1-201ENST00000384884 83 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 SNORA3.2-201ENST00000408221 125 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 RNU4-53P-201ENST00000410828 140 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 MTCO3P19-201ENST00000415864 321 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms