Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 RNU6-1208P-201ENST00000459588 107 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RPL23AP75-201ENST00000491601 451 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-1332P-201ENST00000516666 104 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNA5SP454-201ENST00000517231 127 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 CYCSP23-201ENST00000519781 313 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MIR4498-201ENST00000577599 66 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC121247.2-201ENST00000604776 136 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNORD11B-201ENST00000607707 90 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AL133216.2-202ENST00000634512 349 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU1-124P-201ENST00000363861 145 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-392P-201ENST00000364926 101 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-1186P-201ENST00000410429 97 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNA5SP504-201ENST00000410676 117 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MRPL35P3-201ENST00000421557 364 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC245047.3-201ENST00000429428 127 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC092991.1-201ENST00000477176 376 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 BET1P1-201ENST00000482276 359 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNORD116-28-201ENST00000516123 91 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MTND1P5-201ENST00000517906 940 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 CPDP1-201ENST00000579660 283 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AL390123.1-201ENST00000603216 237 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 HSPE1P19-201ENST00000603327 295 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC013244.2-201ENST00000603396 103 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MIR8054-201ENST00000620877 86 ntBASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
IGHV3-43A0A0B4J1X8 EIF4E2P1-201ENST00000393781 255 ntBASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU6-321P-201ENST00000410912 106 ntBASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU6-261P-201ENST00000459506 102 ntBASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC083798.1-201ENST00000472671 131 ntBASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU6-237P-201ENST00000515985 71 ntBASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNA5SP54-201ENST00000516951 92 ntBASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC016957.1-201ENST00000534895 309 ntBASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 MIR5695-201ENST00000579717 85 ntBASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AP001330.5-201ENST00000607176 411 ntBASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC106754.2-201ENST00000623006 233 ntBASIC0.71□□□□□ -2.3
IGHV3-43A0A0B4J1X8 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 SNORA69-201ENST00000383895 132 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU6-1080P-201ENST00000383982 107 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU6-245P-201ENST00000384020 107 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU6-505P-201ENST00000384427 107 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 MIR532-201ENST00000385025 91 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU6-440P-201ENST00000390882 105 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 MRPL42P3-201ENST00000401492 326 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AL603825.1-201ENST00000438481 80 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC091885.1-201ENST00000506658 268 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 UBL5P1-201ENST00000507979 193 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 SNORA31.2-201ENST00000516019 134 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU6-922P-201ENST00000516753 99 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 SNORA70.22-201ENST00000517160 124 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC104383.1-201ENST00000530297 370 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC100830.2-201ENST00000581636 240 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 FAM71BP1-201ENST00000604431 523 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AL133215.3-201ENST00000609801 448 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC017083.3-201ENST00000609955 700 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AL021879.1-201ENST00000611756 288 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 FAM157A-202ENST00000615155 405 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC012676.2-201ENST00000619258 186 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC073534.2-201ENST00000620377 381 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 SNORD3E-202ENST00000627253 216 ntBASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
IGHV3-43A0A0B4J1X8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 OR4G1P-203ENST00000641984 1631 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 Y_RNA.167-201ENST00000363735 109 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU6-1322P-201ENST00000364309 107 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 SNORD87-201ENST00000364849 89 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AL590002.1-201ENST00000406554 418 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AL034345.1-201ENST00000407768 123 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RAB28P5-201ENST00000427490 651 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 MTND3P16-201ENST00000452205 344 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC091133.4-201ENST00000511142 308 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 RNU7-128P-201ENST00000517247 62 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC026371.1-201ENST00000551867 419 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AL137100.2-201ENST00000555786 315 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC008088.1-201ENST00000580993 280 ntBASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.69□□□□□ -2.3
IGHV3-43A0A0B4J1X8 AC022432.1-201ENST00000595739 310 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms