Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
NUP50Q9UKX7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
NUP50Q9UKX7 Y_RNA.167-201ENST00000363735 109 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 SNORA69-201ENST00000383895 132 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 SNORA67.2-201ENST00000384300 149 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 RNA5SP109-201ENST00000391010 116 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 Y_RNA.582-201ENST00000391023 95 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 TOMM22P2-201ENST00000430735 237 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 MTCO2P16-201ENST00000436962 677 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 RNU6-261P-201ENST00000459506 102 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 RNU6-1208P-201ENST00000459588 107 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 AC083798.1-201ENST00000472671 131 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 HMGN1P7-201ENST00000491722 313 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 RNU6-1146P-201ENST00000516282 102 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.1□□□□□ -2.23
NUP50Q9UKX7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.1□□□□□ -2.23
NUP50Q9UKX7 RAB11AP2-201ENST00000545905 639 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.1□□□□□ -2.23
NUP50Q9UKX7 AC006362.1-201ENST00000567392 174 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 AC097065.2-201ENST00000608159 533 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 MIR8076-201ENST00000611401 83 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 AC040896.1-201ENST00000613819 479 ntBASIC1.1□□□□□ -2.23
NUP50Q9UKX7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
NUP50Q9UKX7 ELL2P3-201ENST00000457883 1602 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 RNU6-214P-201ENST00000384130 107 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 MIR515-2-201ENST00000384883 83 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 MIR515-1-201ENST00000384884 83 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
NUP50Q9UKX7 RPL21P1-201ENST00000399532 476 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 MIR1253-201ENST00000408273 105 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.09□□□□□ -2.23
NUP50Q9UKX7 CDK8P2-201ENST00000415020 547 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 AC016909.1-201ENST00000415916 166 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 AC074290.1-201ENST00000448883 135 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.09□□□□□ -2.23
NUP50Q9UKX7 MTND3P16-201ENST00000452205 344 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.09□□□□□ -2.23
NUP50Q9UKX7 AL163195.1-201ENST00000496941 348 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.09□□□□□ -2.23
NUP50Q9UKX7 AC010424.1-201ENST00000506336 297 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.09□□□□□ -2.23
NUP50Q9UKX7 RNU6-1332P-201ENST00000516666 104 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 MTND1P35-201ENST00000526739 508 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.09□□□□□ -2.23
NUP50Q9UKX7 MZT1P2-201ENST00000604387 248 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 ZNF204P-201ENST00000416749 2397 ntBASIC1.09□□□□□ -2.23
NUP50Q9UKX7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
NUP50Q9UKX7 Y_RNA.77-201ENST00000362962 107 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 SNORA25.8-201ENST00000364831 128 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 RNA5SP259-201ENST00000365541 109 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 RNU6-784P-201ENST00000384330 106 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 MIR1276-201ENST00000408707 83 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
NUP50Q9UKX7 MTND1P26-201ENST00000440488 538 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 RNU1-123P-201ENST00000458950 160 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 RPL23AP75-201ENST00000491601 451 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 MTCO1P29-201ENST00000496868 288 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 AC091885.1-201ENST00000506658 268 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 AC090821.2-201ENST00000523552 176 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 MTND3P12-201ENST00000559068 328 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 TPRKBP2-201ENST00000565969 475 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 AL929325.1-201ENST00000603096 117 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 MIR6504-201ENST00000613520 61 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 FAM157A-202ENST00000615155 405 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 AC068792.1-201ENST00000621354 417 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 AL078596.1-201ENST00000624856 447 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 MIR3974-201ENST00000637126 96 ntBASIC1.08□□□□□ -2.24
NUP50Q9UKX7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NUP50Q9UKX7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
NUP50Q9UKX7 RNU6-1322P-201ENST00000364309 107 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 Y_RNA.269-201ENST00000364685 89 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 MIR618-201ENST00000385287 98 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 RNA5SP323-201ENST00000391094 133 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 EIF4E2P1-201ENST00000393781 255 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 DEFB108C-201ENST00000400154 252 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 AL356776.1-201ENST00000406574 447 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 AL606517.2-201ENST00000442855 241 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 RPS27P1-201ENST00000450552 247 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.07□□□□□ -2.24
NUP50Q9UKX7 MTCYBP18-201ENST00000501056 747 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.07□□□□□ -2.24
NUP50Q9UKX7 RNU1-117P-201ENST00000517041 158 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 AC024995.1-201ENST00000523014 93 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 AC100830.2-201ENST00000581636 240 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 AC146944.4-201ENST00000602697 718 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.07□□□□□ -2.24
NUP50Q9UKX7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 MIR8065-201ENST00000620577 100 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 AC090582.1-201ENST00000636321 199 ntBASIC1.07□□□□□ -2.24
NUP50Q9UKX7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
NUP50Q9UKX7 RNU6-933P-201ENST00000384424 107 ntBASIC1.06□□□□□ -2.24
NUP50Q9UKX7 MIR514A2-201ENST00000385131 88 ntBASIC1.06□□□□□ -2.24
NUP50Q9UKX7 MIR514A3-201ENST00000385132 88 ntBASIC1.06□□□□□ -2.24
NUP50Q9UKX7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms