Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 AL606517.2-201ENST00000442855 241 ntBASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RPS3AP17-201ENST00000472594 777 ntBASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNORA40.12-201ENST00000516329 111 ntBASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU1-117P-201ENST00000517041 158 ntBASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MTND1P35-201ENST00000526739 508 ntBASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 TPRKBP2-201ENST00000565969 475 ntBASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AL359821.1-201ENST00000605519 182 ntBASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC103810.9-201ENST00000606688 112 ntBASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AL158063.1-201ENST00000615349 536 ntBASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 snoZ196.1-201ENST00000625269 89 ntBASIC0.77□□□□□ -2.29
IGHV3-43A0A0B4J1X8 ZNF204P-201ENST00000416749 2397 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNORA22-201ENST00000383907 134 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNORA70.7-201ENST00000384159 133 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNORA25-201ENST00000384384 134 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-933P-201ENST00000384424 107 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNORA22C-201ENST00000384614 134 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNY3P9-201ENST00000384727 106 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MIR450B-201ENST00000401182 78 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AL049545.1-201ENST00000401856 572 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC008134.1-201ENST00000420943 193 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MRPS10P2-201ENST00000431226 381 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC092473.1-201ENST00000441098 221 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 HSPE1P13-201ENST00000451143 297 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-956P-201ENST00000458868 103 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SRRM1P2-201ENST00000464531 1192 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 HMGB1P29-201ENST00000505659 499 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC108729.3-201ENST00000513484 108 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU1-142P-201ENST00000516682 145 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AL022345.2-201ENST00000606307 135 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 BX284668.6-201ENST00000606899 438 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC137590.2-201ENST00000619709 240 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC008873.1-201ENST00000625051 138 ntBASIC0.76□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-38P-201ENST00000384085 107 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-214P-201ENST00000384130 107 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNORA75-201ENST00000384158 137 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNORA67.2-201ENST00000384300 149 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-1031P-201ENST00000384773 107 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MIR222-201ENST00000384992 110 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MIR487A-201ENST00000385009 80 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RPL23AP36-201ENST00000413895 458 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 CDK8P2-201ENST00000415020 547 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RPS27P1-201ENST00000450552 247 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RPS23P4-201ENST00000487908 423 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 HMGN1P7-201ENST00000491722 313 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 Y_RNA.654-201ENST00000497848 106 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC005840.1-201ENST00000498412 377 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC092436.3-201ENST00000511788 257 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RN7SKP298-201ENST00000515950 94 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC025647.1-201ENST00000517879 253 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MIR8076-201ENST00000611401 83 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AL359075.3-201ENST00000613288 217 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC027335.2-201ENST00000624030 375 ntBASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.75□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-1240P-201ENST00000365155 104 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU4-20P-201ENST00000365601 151 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-784P-201ENST00000384330 106 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU4-55P-201ENST00000410731 137 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC092447.3-201ENST00000426027 686 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-221P-201ENST00000459541 99 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RPL39P38-201ENST00000467018 153 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MTCO1P29-201ENST00000496868 288 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC103851.1-201ENST00000506833 274 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 TRMT112P2-201ENST00000512910 132 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 SNORA31.10-201ENST00000516482 106 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-344P-201ENST00000516635 111 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RNU6-165P-201ENST00000517170 99 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC022217.4-201ENST00000604389 163 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC092807.2-201ENST00000609367 243 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 Z69908.1-201ENST00000622603 247 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 U6.108-201ENST00000637764 58 ntBASIC0.74□□□□□ -2.29
IGHV3-43A0A0B4J1X8 Y_RNA.338-201ENST00000365320 114 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 RN7SKP200-201ENST00000410564 320 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 MTCO2P16-201ENST00000436962 677 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 AC005002.2-201ENST00000438228 269 ntBASIC0.73□□□□□ -2.29
IGHV3-43A0A0B4J1X8 DYNLT3P2-201ENST00000442517 295 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms