Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 Y_RNA.327-201ENST00000365201 102 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU6-53P-201ENST00000365367 106 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU5A-6P-201ENST00000384136 116 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU6-975P-201ENST00000384296 105 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU6-939P-201ENST00000384634 107 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MIR549A-201ENST00000385268 96 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RPS26P42-201ENST00000413485 326 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 SNRPEP10-201ENST00000420249 274 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC073464.1-201ENST00000429823 534 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 HMGN2P34-201ENST00000437647 269 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RPS29P28-201ENST00000446439 141 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC009237.7-201ENST00000447357 229 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 NFU1P2-201ENST00000448700 469 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL133373.1-201ENST00000497098 94 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC010493.1-201ENST00000513479 292 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU6-189P-201ENST00000516120 101 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 Z99497.2-201ENST00000603634 310 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AP000907.4-201ENST00000604143 237 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC064836.2-201ENST00000609491 462 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MIR8065-201ENST00000620577 100 ntBASIC0.84□□□□□ -2.27
IGHV3-43A0A0B4J1X8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.84□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU5B-2P-201ENST00000363036 113 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 Y_RNA.123-201ENST00000363338 102 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU6-1317P-201ENST00000364582 104 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU6-534P-201ENST00000364877 106 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNA5SP259-201ENST00000365541 109 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU6-1286P-201ENST00000383871 107 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU6-348P-201ENST00000384386 107 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MIR515-2-201ENST00000384883 83 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MIR515-1-201ENST00000384884 83 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MIR618-201ENST00000385287 98 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 Y_RNA.595-201ENST00000410403 105 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MTCO3P8-201ENST00000453691 755 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MTCO2P18-201ENST00000457151 658 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 COX6CP14-201ENST00000469580 174 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 HMGN1P12-201ENST00000499125 195 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU6-1146P-201ENST00000516282 102 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU7-40P-201ENST00000516397 64 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC087854.1-201ENST00000519706 414 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 LRRC34P1-201ENST00000542742 915 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC025423.5-201ENST00000550230 219 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AL442163.3-201ENST00000554110 156 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MIR4528-201ENST00000577763 90 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MZT1P2-201ENST00000604387 248 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AL359757.2-201ENST00000624309 274 ntBASIC0.83□□□□□ -2.28
IGHV3-43A0A0B4J1X8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU6-1305P-201ENST00000364353 104 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 Y_RNA.381-201ENST00000365666 102 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU6-968P-201ENST00000384076 107 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU6-417P-201ENST00000384712 107 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 SNORD37.1-201ENST00000390968 65 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU6-1158P-201ENST00000391167 107 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC004866.1-201ENST00000411748 78 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MTND2P9-201ENST00000422293 931 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 Z82205.1-201ENST00000428456 297 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC074290.1-201ENST00000448883 135 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 TPTE2P5-203ENST00000458118 728 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RN7SKP88-201ENST00000516847 250 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC145350.1-201ENST00000567426 208 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MIR4424-201ENST00000585257 86 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AL391646.1-201ENST00000603860 190 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 snoU13.31-201ENST00000607291 104 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RMST_3.1-201ENST00000611651 109 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 7SK.8-201ENST00000612110 250 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 7SK.11-201ENST00000615477 250 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 7SK.13-201ENST00000622040 250 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC023510.2-201ENST00000622162 746 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 FER-210ENST00000628534 558 ntTSL 5 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 AC099654.5-201ENST00000636479 350 ntBASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
IGHV3-43A0A0B4J1X8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.81□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
IGHV3-43A0A0B4J1X8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
IGHV3-43A0A0B4J1X8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNA5SP323-201ENST00000391094 133 ntBASIC0.81□□□□□ -2.28
IGHV3-43A0A0B4J1X8 MIR1253-201ENST00000408273 105 ntBASIC0.81□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RNU6-57P-201ENST00000411348 103 ntBASIC0.81□□□□□ -2.28
IGHV3-43A0A0B4J1X8 RPL37P10-201ENST00000412884 288 ntBASIC0.81□□□□□ -2.28
IGHV3-43A0A0B4J1X8 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.81□□□□□ -2.28
IGHV3-43A0A0B4J1X8 USP9YP29-201ENST00000445112 563 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms