Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 AL031667.1-201ENST00000440222 725 ntBASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MTND3P7-201ENST00000474435 343 ntBASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MTND4P7-201ENST00000523876 130 ntBASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC016256.1-201ENST00000547971 354 ntBASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MIR5006-201ENST00000583027 110 ntBASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MIR4769-201ENST00000584126 77 ntBASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MIR4295-201ENST00000585286 85 ntBASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 SNORD114-21-201ENST00000606412 72 ntBASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC109347.2-201ENST00000610220 349 ntBASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MIR338-201ENST00000636369 67 ntBASIC0.88□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 SNORA25.8-201ENST00000364831 128 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 SNORA72.2-201ENST00000365028 127 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 SNORA4.2-201ENST00000365313 147 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MIR194-1-201ENST00000384892 85 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MTND3P9-201ENST00000429526 346 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC073415.1-201ENST00000449240 153 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU6-1037P-201ENST00000459571 107 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 CCDC34P1-201ENST00000507441 517 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNA5SP458-201ENST00000516188 119 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MTCO2P4-201ENST00000517968 247 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC026470.2-201ENST00000561492 181 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 CYP3A52P-201ENST00000563326 91 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MIR4709-201ENST00000577272 72 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC004223.2-201ENST00000590309 544 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC016727.2-201ENST00000603988 621 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC080078.3-201ENST00000605407 463 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL355802.3-201ENST00000607571 545 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC104458.1-201ENST00000608243 463 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 HULC.1-201ENST00000612720 240 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL359697.1-201ENST00000624879 587 ntBASIC0.87□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 SNORA33-201ENST00000363664 130 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 SNORA29-201ENST00000384183 140 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU6-1235P-201ENST00000384559 107 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MIR150-201ENST00000385048 84 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL606923.1-201ENST00000406616 190 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RN7SKP142-201ENST00000411236 328 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 SNX2P2-201ENST00000424553 323 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 USP9YP14-201ENST00000430663 563 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC004386.2-201ENST00000441858 148 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC016717.1-201ENST00000448918 286 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU7-34P-201ENST00000459394 64 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU6-498P-201ENST00000459468 107 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RPS29P27-201ENST00000463711 170 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC114982.1-201ENST00000469402 321 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RPS26P45-201ENST00000471748 340 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL163195.1-201ENST00000496941 348 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 ARL2BPP4-201ENST00000506854 471 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC025465.4-201ENST00000513422 638 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 SNORA14.1-201ENST00000516113 141 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RAB11AP2-201ENST00000545905 639 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MIR4760-201ENST00000585040 80 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL365434.2-201ENST00000607979 234 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 TCL6_2.1-201ENST00000615162 119 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC091895.1-201ENST00000624494 256 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC005609.4-201ENST00000625071 447 ntBASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.86□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNA5SP327-201ENST00000362494 101 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 snoU2-30.2-201ENST00000362805 70 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNA5SP494-201ENST00000410653 129 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 TOMM22P2-201ENST00000430735 237 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 U8.21-201ENST00000459536 136 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL163540.1-201ENST00000485382 386 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RNU6-948P-201ENST00000516374 107 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC104576.1-201ENST00000524225 88 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 RRN3P3-201ENST00000549207 578 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL512310.8-201ENST00000550183 120 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC040896.1-201ENST00000613819 479 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AL354950.2-201ENST00000617939 290 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC006001.4-201ENST00000622243 395 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 AC009033.1-201ENST00000624279 431 ntBASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.85□□□□□ -2.27
IGHV3-43A0A0B4J1X8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms