Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 Y_RNA.5-201ENST00000362334 102 ntBASIC3.03□□□□□ -1.92
SNX2O60749 Y_RNA.123-201ENST00000363338 102 ntBASIC3.03□□□□□ -1.92
SNX2O60749 SNORA71.1-201ENST00000364523 117 ntBASIC3.03□□□□□ -1.92
SNX2O60749 MIR544A-201ENST00000384855 91 ntBASIC3.03□□□□□ -1.92
SNX2O60749 AL591034.2-201ENST00000402839 359 ntBASIC3.03□□□□□ -1.92
SNX2O60749 AC096664.2-201ENST00000411843 406 ntBASIC3.03□□□□□ -1.92
SNX2O60749 AP000275.1-201ENST00000411943 390 ntBASIC3.03□□□□□ -1.92
SNX2O60749 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX2O60749 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX2O60749 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX2O60749 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX2O60749 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX2O60749 AP001324.2-201ENST00000461163 319 ntBASIC3.03□□□□□ -1.92
SNX2O60749 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX2O60749 AC097462.2-201ENST00000504623 481 ntBASIC3.03□□□□□ -1.92
SNX2O60749 AC022493.2-201ENST00000506122 481 ntBASIC3.03□□□□□ -1.92
SNX2O60749 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.03□□□□□ -1.92
SNX2O60749 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX2O60749 AP002404.1-201ENST00000532005 451 ntBASIC3.03□□□□□ -1.92
SNX2O60749 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX2O60749 MIR3171-201ENST00000584270 74 ntBASIC3.03□□□□□ -1.92
SNX2O60749 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX2O60749 SNRPGP17-201ENST00000603780 214 ntBASIC3.03□□□□□ -1.92
SNX2O60749 HMGB1P24-202ENST00000615653 685 ntBASIC3.03□□□□□ -1.92
SNX2O60749 MIR3529-201ENST00000637713 78 ntBASIC3.03□□□□□ -1.92
SNX2O60749 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SNX2O60749 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SNX2O60749 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SNX2O60749 MIR22-201ENST00000362190 85 ntBASIC3.02□□□□□ -1.93
SNX2O60749 RNU6-1115P-201ENST00000362490 106 ntBASIC3.02□□□□□ -1.93
SNX2O60749 Y_RNA.128-201ENST00000363391 112 ntBASIC3.02□□□□□ -1.93
SNX2O60749 SNORD32A-201ENST00000364805 84 ntBASIC3.02□□□□□ -1.93
SNX2O60749 Y_RNA.463-201ENST00000384271 102 ntBASIC3.02□□□□□ -1.93
SNX2O60749 RNU6-622P-201ENST00000384272 103 ntBASIC3.02□□□□□ -1.93
SNX2O60749 MIR548P-201ENST00000408336 84 ntBASIC3.02□□□□□ -1.93
SNX2O60749 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX2O60749 Z98742.2-201ENST00000431564 187 ntBASIC3.02□□□□□ -1.93
SNX2O60749 AL353997.1-201ENST00000432936 108 ntBASIC3.02□□□□□ -1.93
SNX2O60749 RPL23AP50-201ENST00000434149 455 ntBASIC3.02□□□□□ -1.93
SNX2O60749 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX2O60749 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX2O60749 RPL39P40-201ENST00000445481 146 ntBASIC3.02□□□□□ -1.93
SNX2O60749 AC079354.2-201ENST00000453523 154 ntBASIC3.02□□□□□ -1.93
SNX2O60749 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.02□□□□□ -1.93
SNX2O60749 AP003072.1-201ENST00000531740 145 ntBASIC3.02□□□□□ -1.93
SNX2O60749 ELOCP31-201ENST00000540463 467 ntBASIC3.02□□□□□ -1.93
SNX2O60749 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SNX2O60749 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX2O60749 AC096772.1-201ENST00000609146 564 ntBASIC3.02□□□□□ -1.93
SNX2O60749 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.02□□□□□ -1.93
SNX2O60749 AC024581.2-201ENST00000619986 252 ntBASIC3.02□□□□□ -1.93
SNX2O60749 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX2O60749 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX2O60749 AL161431.1-201ENST00000618966 4205 ntBASIC3.02□□□□□ -1.93
SNX2O60749 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX2O60749 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX2O60749 Y_RNA.445-201ENST00000384168 102 ntBASIC3.01□□□□□ -1.93
SNX2O60749 SNORA41-201ENST00000384675 132 ntBASIC3.01□□□□□ -1.93
SNX2O60749 RNU6-1245P-201ENST00000411130 106 ntBASIC3.01□□□□□ -1.93
SNX2O60749 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX2O60749 AC011816.1-201ENST00000441346 546 ntBASIC3.01□□□□□ -1.93
SNX2O60749 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX2O60749 AL137792.2-201ENST00000443484 235 ntBASIC3.01□□□□□ -1.93
SNX2O60749 AC012308.1-201ENST00000451232 178 ntBASIC3.01□□□□□ -1.93
SNX2O60749 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX2O60749 Y_RNA.631-201ENST00000459607 101 ntBASIC3.01□□□□□ -1.93
SNX2O60749 RPL30P12-201ENST00000474666 353 ntBASIC3.01□□□□□ -1.93
SNX2O60749 AC103975.1-201ENST00000482506 483 ntBASIC3.01□□□□□ -1.93
SNX2O60749 RPL36AP48-201ENST00000485521 314 ntBASIC3.01□□□□□ -1.93
SNX2O60749 AC114801.2-201ENST00000503825 781 ntBASIC3.01□□□□□ -1.93
SNX2O60749 AC091826.1-201ENST00000514065 313 ntBASIC3.01□□□□□ -1.93
SNX2O60749 RN7SKP43-201ENST00000516173 320 ntBASIC3.01□□□□□ -1.93
SNX2O60749 RNU6-699P-201ENST00000517081 110 ntBASIC3.01□□□□□ -1.93
SNX2O60749 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX2O60749 MIR5696-201ENST00000578474 85 ntBASIC3.01□□□□□ -1.93
SNX2O60749 CYP2C61P-201ENST00000604072 290 ntBASIC3.01□□□□□ -1.93
SNX2O60749 AC009318.2-201ENST00000610917 651 ntBASIC3.01□□□□□ -1.93
SNX2O60749 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
SNX2O60749 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX2O60749 MIR622-201ENST00000638396 96 ntBASIC3.01□□□□□ -1.93
SNX2O60749 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNX2O60749 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNX2O60749 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
SNX2O60749 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNX2O60749 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3□□□□□ -1.93
SNX2O60749 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3□□□□□ -1.93
SNX2O60749 VTRNA1-1-201ENST00000363120 99 ntBASIC3□□□□□ -1.93
SNX2O60749 Y_RNA.326-201ENST00000365176 113 ntBASIC3□□□□□ -1.93
SNX2O60749 RNU6-220P-201ENST00000390919 107 ntBASIC3□□□□□ -1.93
SNX2O60749 BTF3L4P2-201ENST00000392798 346 ntBASIC3□□□□□ -1.93
SNX2O60749 NDUFB4P4-201ENST00000404822 243 ntBASIC3□□□□□ -1.93
SNX2O60749 EIF4EP2-201ENST00000422816 654 ntBASIC3□□□□□ -1.93
SNX2O60749 PMCHL1-202ENST00000423102 261 ntBASIC3□□□□□ -1.93
SNX2O60749 AC124916.1-201ENST00000444020 547 ntBASIC3□□□□□ -1.93
SNX2O60749 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3□□□□□ -1.93
SNX2O60749 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3□□□□□ -1.93
SNX2O60749 SNRPGP7-201ENST00000469016 106 ntBASIC3□□□□□ -1.93
SNX2O60749 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3□□□□□ -1.93
SNX2O60749 RN7SL20P-201ENST00000488827 297 ntBASIC3□□□□□ -1.93
SNX2O60749 RN7SL633P-201ENST00000488974 297 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms