Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 RNU6-748P-201ENST00000384648 107 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 Y_RNA.594-201ENST00000410373 140 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AC074117.2-201ENST00000417130 397 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 USP9YP30-201ENST00000430729 455 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AL133396.1-201ENST00000432048 687 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AL513328.1-201ENST00000446460 224 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 RPL30P15-201ENST00000457129 321 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 SNORD5.1-201ENST00000458800 75 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AC008571.1-201ENST00000467232 300 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 RPS26P21-201ENST00000475397 348 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 CPDP1-201ENST00000579660 283 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 MIR4769-201ENST00000584126 77 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AP000654.2-201ENST00000605633 586 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AL133255.1-201ENST00000606374 441 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 MIR3976-201ENST00000606807 139 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 AC098657.3-201ENST00000620434 263 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 HAUS6P2-201ENST00000433254 2404 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.21□□□□□ -1.9
TRIM43BA6NCK2 GABRG2-229ENST00000641017 3628 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 Y_RNA.813-201ENST00000364639 102 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 SNORA51.4-201ENST00000364993 124 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 RNU6-843P-201ENST00000384454 104 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 SNORD116-29-201ENST00000384516 83 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 UBL5P3-201ENST00000475112 231 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 GZMAP1-201ENST00000503054 631 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 PTP4A1P4-201ENST00000512479 322 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 Y_RNA.670-201ENST00000516255 105 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 AP005902.1-201ENST00000521358 186 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 AC109446.1-201ENST00000566172 220 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 MIR8076-201ENST00000611401 83 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM43BA6NCK2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 Y_RNA.2-201ENST00000362330 96 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 RNU4-76P-201ENST00000364509 141 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 Y_RNA.419-201ENST00000384041 102 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 Y_RNA.473-201ENST00000384333 102 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 MTND3P9-201ENST00000429526 346 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 ARL5AP4-201ENST00000430731 512 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 RNU6-1170P-201ENST00000515974 106 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 RNU6-1213P-201ENST00000517075 94 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 AC011494.1-201ENST00000596454 237 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 AL391813.1-201ENST00000603098 260 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 AC093831.2-201ENST00000624393 3427 ntBASIC3.19□□□□□ -1.9
TRIM43BA6NCK2 AC091564.4-201ENST00000533934 2194 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 MTND5P19-201ENST00000424872 1794 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 RNU6-227P-201ENST00000362865 103 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 RNU6-1059P-201ENST00000363752 98 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 RNU6-487P-201ENST00000365430 104 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 BTF3L4P2-201ENST00000392798 346 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 RN7SKP58-201ENST00000411010 305 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 RPL21P2-201ENST00000440049 481 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 RPL7P42-201ENST00000481005 679 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 RN7SL20P-201ENST00000488827 297 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 RNU6-307P-201ENST00000516743 106 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 SNORA31.23-201ENST00000517219 133 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 MIR4273-201ENST00000582824 84 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 MIR4719-201ENST00000585233 84 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 AC241585.2-209ENST00000638217 143 ntBASIC3.18□□□□□ -1.9
TRIM43BA6NCK2 RBBP8P1-201ENST00000449447 1844 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms