Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.69□□□□□ -1.98
MT-ND4P03905 AC078899.3-201ENST00000599065 212 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.69□□□□□ -1.98
MT-ND4P03905 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.69□□□□□ -1.98
MT-ND4P03905 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.69□□□□□ -1.98
MT-ND4P03905 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AL121594.5-201ENST00000631724 573 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.69□□□□□ -1.98
MT-ND4P03905 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
MT-ND4P03905 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.69□□□□□ -1.98
MT-ND4P03905 AL136520.1-201ENST00000600311 1322 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 SGO1P1-201ENST00000603525 1447 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
MT-ND4P03905 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MT-ND4P03905 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
MT-ND4P03905 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.68□□□□□ -1.98
MT-ND4P03905 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
MT-ND4P03905 RNU6-619P-201ENST00000365146 108 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 RNU6-339P-201ENST00000384310 107 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 MIR649-201ENST00000384843 97 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 PTMAP2-201ENST00000397627 327 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 OR1AA1P-201ENST00000419597 916 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.68□□□□□ -1.98
MT-ND4P03905 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.68□□□□□ -1.98
MT-ND4P03905 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.68□□□□□ -1.98
MT-ND4P03905 NIPA2P1-201ENST00000426223 976 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
MT-ND4P03905 YWHAZP7-201ENST00000436906 631 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 AC002542.1-201ENST00000440683 193 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 MOB1AP2-201ENST00000446060 614 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 PDSS1P2-201ENST00000449397 678 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 AC104073.1-201ENST00000451988 151 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 HMGN3P1-201ENST00000453847 193 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 AL445669.2-201ENST00000454425 421 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
MT-ND4P03905 AC104472.2-201ENST00000469035 601 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 AC010301.1-201ENST00000473936 355 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.68□□□□□ -1.98
MT-ND4P03905 AC006499.5-201ENST00000505037 514 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 RNA5SP76-201ENST00000516277 87 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.68□□□□□ -1.98
MT-ND4P03905 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.68□□□□□ -1.98
MT-ND4P03905 AP003049.1-201ENST00000529418 457 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.68□□□□□ -1.98
MT-ND4P03905 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.68□□□□□ -1.98
MT-ND4P03905 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.68□□□□□ -1.98
MT-ND4P03905 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.68□□□□□ -1.98
MT-ND4P03905 AC073657.2-201ENST00000605661 303 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 AC013468.1-201ENST00000608680 598 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 AC069234.5-201ENST00000611056 416 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 AL162574.2-201ENST00000614618 657 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 AC090116.1-201ENST00000615679 446 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.68□□□□□ -1.98
MT-ND4P03905 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
MT-ND4P03905 AL049781.1-201ENST00000623195 3585 ntBASIC2.68□□□□□ -1.98
MT-ND4P03905 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
MT-ND4P03905 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MT-ND4P03905 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MT-ND4P03905 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
MT-ND4P03905 RNU6-989P-201ENST00000362756 107 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 RNU6-353P-201ENST00000364266 108 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 OR6K3-202ENST00000368146 996 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 OR1L1-202ENST00000373686 1083 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 MIR490-201ENST00000384865 128 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 MIR200C-201ENST00000384980 68 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MT-ND4P03905 MIR887-201ENST00000401258 79 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 AC245052.5-201ENST00000416320 649 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.67□□□□□ -1.98
MT-ND4P03905 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MT-ND4P03905 FO393414.1-201ENST00000428697 1184 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.67□□□□□ -1.98
MT-ND4P03905 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.67□□□□□ -1.98
MT-ND4P03905 AC234064.1-201ENST00000436312 247 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 RABEPKP1-201ENST00000440529 1026 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.67□□□□□ -1.98
MT-ND4P03905 ELOCP23-201ENST00000452014 332 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 OR5H5P-201ENST00000503164 928 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 MTCO2P9-201ENST00000503214 694 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 AC109471.1-201ENST00000511631 612 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 RNU6-334P-201ENST00000517072 102 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.67□□□□□ -1.98
MT-ND4P03905 AP000790.1-201ENST00000528891 737 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 AP003168.1-201ENST00000530091 307 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.67□□□□□ -1.98
MT-ND4P03905 MIR2682-201ENST00000580305 110 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 SNORD39.3-201ENST00000584451 71 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.67□□□□□ -1.98
MT-ND4P03905 AP002906.1-201ENST00000603405 233 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 AC008962.1-201ENST00000605729 304 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 VIS1.1-201ENST00000610517 203 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MT-ND4P03905 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MT-ND4P03905 AC068722.2-201ENST00000618734 544 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 AC022509.4-201ENST00000621404 572 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 AP000676.4-201ENST00000624659 623 ntBASIC2.67□□□□□ -1.98
MT-ND4P03905 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.67□□□□□ -1.98
MT-ND4P03905 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
MT-ND4P03905 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms