Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
MT-ND4P03905 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MT-ND4P03905 RNU1-85P-201ENST00000364127 164 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 RNU6-609P-201ENST00000365459 107 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MT-ND4P03905 AC234772.1-201ENST00000377927 937 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 RNU6-921P-201ENST00000384361 107 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 MIR181B1-201ENST00000385240 110 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 MT-TC-201ENST00000387405 66 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AP002784.2-201ENST00000397300 549 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 RPS3AP26-201ENST00000398259 784 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AL121972.1-201ENST00000402023 252 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 SFR1P1-201ENST00000403720 688 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.7□□□□□ -1.98
MT-ND4P03905 RNU4-65P-201ENST00000410473 140 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 RNU4-78P-201ENST00000410940 126 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND4P03905 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND4P03905 MTCO2P1-201ENST00000424648 477 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC096632.1-201ENST00000427395 310 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 MTATP6P11-201ENST00000428071 670 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND4P03905 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND4P03905 RNU7-140P-201ENST00000459546 60 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC017015.1-201ENST00000477387 286 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND4P03905 RPL7P38-201ENST00000488396 739 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND4P03905 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND4P03905 RNU6-56P-201ENST00000516986 93 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND4P03905 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MT-ND4P03905 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.7□□□□□ -1.98
MT-ND4P03905 OR4A45P-201ENST00000529954 901 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.7□□□□□ -1.98
MT-ND4P03905 OR8K4P-201ENST00000534608 872 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC007458.1-201ENST00000542812 373 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 HIGD1AP1-201ENST00000550979 275 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.7□□□□□ -1.98
MT-ND4P03905 AC012182.1-201ENST00000570133 895 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC010653.1-201ENST00000571108 881 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 MTCO1P40-201ENST00000574371 625 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 MIR4789-201ENST00000577469 82 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC124283.4-201ENST00000581815 456 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC083760.1-201ENST00000589621 670 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC025588.3-201ENST00000604182 274 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC073387.2-201ENST00000604797 784 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC105227.2-201ENST00000615075 605 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AL355365.1-201ENST00000616480 294 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AL731566.2-201ENST00000618971 317 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC091046.2-201ENST00000620775 665 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
MT-ND4P03905 AC090617.7-201ENST00000623952 126 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AC098679.5-201ENST00000624394 571 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 AL356094.1-201ENST00000624663 1212 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.7□□□□□ -1.98
MT-ND4P03905 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.7□□□□□ -1.98
MT-ND4P03905 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.7□□□□□ -1.98
MT-ND4P03905 AC092435.3-201ENST00000565538 3654 ntBASIC2.7□□□□□ -1.98
MT-ND4P03905 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.7□□□□□ -1.98
MT-ND4P03905 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
MT-ND4P03905 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
MT-ND4P03905 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
MT-ND4P03905 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
MT-ND4P03905 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
MT-ND4P03905 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.69□□□□□ -1.98
MT-ND4P03905 MIR16-1-201ENST00000385271 89 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 RNU6-932P-201ENST00000391108 106 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 RNA5SP56-201ENST00000410277 118 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AC233981.1-201ENST00000423224 461 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.69□□□□□ -1.98
MT-ND4P03905 DEFB130D-201ENST00000426866 237 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 UBE2D3P3-201ENST00000426992 425 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AC104332.2-201ENST00000429959 156 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 HMGN2P31-201ENST00000432430 273 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.69□□□□□ -1.98
MT-ND4P03905 AL158053.1-201ENST00000441503 453 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.69□□□□□ -1.98
MT-ND4P03905 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.69□□□□□ -1.98
MT-ND4P03905 OR51B8P-201ENST00000449892 769 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 RPL21P41-201ENST00000459863 264 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AC008379.1-201ENST00000463655 464 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AL136126.1-201ENST00000473603 402 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 KLHL2P1-201ENST00000508691 521 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.69□□□□□ -1.98
MT-ND4P03905 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.69□□□□□ -1.98
MT-ND4P03905 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.69□□□□□ -1.98
MT-ND4P03905 HMGB1P1-201ENST00000522557 636 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AC019227.1-201ENST00000526902 510 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.69□□□□□ -1.98
MT-ND4P03905 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.69□□□□□ -1.98
MT-ND4P03905 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.69□□□□□ -1.98
MT-ND4P03905 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.69□□□□□ -1.98
MT-ND4P03905 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.69□□□□□ -1.98
MT-ND4P03905 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.69□□□□□ -1.98
MT-ND4P03905 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.69□□□□□ -1.98
MT-ND4P03905 AC074051.3-201ENST00000570238 358 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 AL669831.4-202ENST00000590817 238 ntBASIC2.69□□□□□ -1.98
MT-ND4P03905 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms