Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AL392088.2-201ENST00000637607 285 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
MT-ND4P03905 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND4P03905 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MT-ND4P03905 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
MT-ND4P03905 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MT-ND4P03905 RNU6-50P-201ENST00000362356 103 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND4P03905 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
MT-ND4P03905 RNU6-441P-201ENST00000384545 106 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 MIR554-201ENST00000384874 96 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 SSXP10-201ENST00000402595 565 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 MIR1250-201ENST00000408098 113 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 BX664727.1-201ENST00000416024 466 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 AC246680.2-201ENST00000422106 389 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND4P03905 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.74□□□□□ -1.97
MT-ND4P03905 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.74□□□□□ -1.97
MT-ND4P03905 GXYLT1P1-201ENST00000446657 490 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 NPM1P13-201ENST00000452663 865 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 RPS24P6-201ENST00000452670 400 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND4P03905 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MT-ND4P03905 SYPL1P1-201ENST00000473622 768 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 AP004217.1-201ENST00000480579 346 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.74□□□□□ -1.97
MT-ND4P03905 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND4P03905 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.74□□□□□ -1.97
MT-ND4P03905 AC121161.1-201ENST00000510606 652 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 RNA5SP468-201ENST00000516782 93 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 RNU1-45P-201ENST00000517191 141 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 AC026403.1-201ENST00000518938 295 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.74□□□□□ -1.97
MT-ND4P03905 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.74□□□□□ -1.97
MT-ND4P03905 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.74□□□□□ -1.97
MT-ND4P03905 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MT-ND4P03905 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND4P03905 AC092470.1-201ENST00000546187 132 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.74□□□□□ -1.97
MT-ND4P03905 AC107954.1-201ENST00000565906 727 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.74□□□□□ -1.97
MT-ND4P03905 MIR5186-201ENST00000577504 120 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 MIR3922-201ENST00000585192 84 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 AC006130.2-201ENST00000586202 326 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND4P03905 AC133794.1-201ENST00000602731 914 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 AC012119.1-201ENST00000603184 222 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
MT-ND4P03905 AL356863.1-201ENST00000623378 1080 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.74□□□□□ -1.97
MT-ND4P03905 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.74□□□□□ -1.97
MT-ND4P03905 AC068620.4-201ENST00000636730 1182 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 AC012442.3-202ENST00000636742 206 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
MT-ND4P03905 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MT-ND4P03905 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MT-ND4P03905 MTND5P7-201ENST00000413558 1798 ntBASIC2.74□□□□□ -1.97
MT-ND4P03905 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MT-ND4P03905 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND4P03905 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND4P03905 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND4P03905 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND4P03905 RNU6-263P-201ENST00000363811 107 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
MT-ND4P03905 RPL5P18-201ENST00000406671 891 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 RNU6-1077P-201ENST00000410506 102 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 RNA5SP344-201ENST00000411081 104 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 RPS29P4-201ENST00000414733 161 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 UBE2V1P9-201ENST00000414760 368 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.73□□□□□ -1.97
MT-ND4P03905 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND4P03905 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 RPS7P2-201ENST00000435134 607 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 AC122718.1-201ENST00000439448 744 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND4P03905 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND4P03905 snoU13.24-201ENST00000458998 104 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 RN7SL542P-201ENST00000467147 294 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 HMGB1P25-201ENST00000468402 607 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND4P03905 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND4P03905 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND4P03905 AC112518.2-201ENST00000508565 425 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND4P03905 AC027338.1-201ENST00000514840 825 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 AC104057.1-201ENST00000515547 497 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 RN7SKP43-201ENST00000516173 320 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 AP000619.3-201ENST00000535634 1127 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
MT-ND4P03905 AC011611.5-201ENST00000552477 578 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND4P03905 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND4P03905 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND4P03905 AC005776.1-201ENST00000603164 290 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 AC026741.1-201ENST00000605892 482 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 AL512506.1-201ENST00000613918 449 ntBASIC2.73□□□□□ -1.97
MT-ND4P03905 AC231759.1-201ENST00000616455 597 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms