Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 CR392039.5-201ENST00000623201 510 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND4P03905 AC108206.1-201ENST00000570186 4159 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND4P03905 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND4P03905 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND4P03905 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND4P03905 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 MAPK10-322ENST00000641485 4530 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND4P03905 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND4P03905 RNU6-444P-201ENST00000383988 108 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 RNU6-1226P-201ENST00000384317 107 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 RNA5SP229-201ENST00000410809 99 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 RPS3AP9-201ENST00000417027 792 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 AL390023.1-201ENST00000428836 262 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 AC018644.1-201ENST00000429934 551 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.76□□□□□ -1.97
MT-ND4P03905 AL133547.1-201ENST00000448546 220 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 AL096803.2-201ENST00000450032 677 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 RPL36AP33-201ENST00000450395 310 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 GTF2IP12-201ENST00000456547 356 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
MT-ND4P03905 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 APOOP4-201ENST00000513530 597 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND4P03905 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.76□□□□□ -1.97
MT-ND4P03905 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND4P03905 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND4P03905 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND4P03905 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND4P03905 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.76□□□□□ -1.97
MT-ND4P03905 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND4P03905 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 BNIP3P5-201ENST00000562290 498 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.76□□□□□ -1.97
MT-ND4P03905 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 BDH2P1-201ENST00000602288 736 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 IGHV3-29-201ENST00000604817 344 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 AC106730.3-201ENST00000624568 641 ntBASIC2.76□□□□□ -1.97
MT-ND4P03905 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND4P03905 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND4P03905 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND4P03905 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
MT-ND4P03905 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.76□□□□□ -1.97
MT-ND4P03905 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND4P03905 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
MT-ND4P03905 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
MT-ND4P03905 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND4P03905 AC024341.1-201ENST00000526444 1552 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.75□□□□□ -1.97
MT-ND4P03905 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
MT-ND4P03905 RPL23AP57-201ENST00000332361 466 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 RNU6-374P-201ENST00000364146 108 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 RNU6-1181P-201ENST00000384191 106 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
MT-ND4P03905 FABP12P1-201ENST00000401911 322 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 AL591034.1-201ENST00000407447 340 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 RPL36AP36-201ENST00000418616 301 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.75□□□□□ -1.97
MT-ND4P03905 AC009237.2-201ENST00000421358 284 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND4P03905 RPP40P1-201ENST00000426762 456 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND4P03905 AC114973.1-201ENST00000429057 632 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.75□□□□□ -1.97
MT-ND4P03905 ATP5C1P1-201ENST00000441945 895 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 HSFY3P-201ENST00000444242 1191 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
MT-ND4P03905 RPL26P28-201ENST00000451325 435 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND4P03905 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.75□□□□□ -1.97
MT-ND4P03905 AC078857.1-201ENST00000469870 667 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 SETP6-201ENST00000479329 568 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 RNF138P1-201ENST00000502765 546 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 PRELID3BP4-201ENST00000515476 571 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 SNORA31.26-201ENST00000517250 137 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 AC087272.1-201ENST00000523624 533 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.75□□□□□ -1.97
MT-ND4P03905 AC124293.1-201ENST00000530034 493 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
MT-ND4P03905 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.75□□□□□ -1.97
MT-ND4P03905 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND4P03905 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.75□□□□□ -1.97
MT-ND4P03905 AC005412.1-201ENST00000580812 1049 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 SNORD84-203ENST00000584275 78 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 MAGOH2P-202ENST00000584384 429 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 AP004247.3-201ENST00000608682 624 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 AC068831.7-201ENST00000616954 363 ntBASIC2.75□□□□□ -1.97
MT-ND4P03905 AC039056.2-201ENST00000622261 511 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms