Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 MIR16-2-201ENST00000362117 81 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 RNA5SP119-201ENST00000362715 117 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 RNA5SP124-201ENST00000362739 110 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND4P03905 DEFB109C-201ENST00000382575 264 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 DEFB109B-201ENST00000382656 264 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 MIR525-201ENST00000384978 85 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND4P03905 RNU6ATAC-201ENST00000408749 126 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 RNA5SP129-201ENST00000410276 118 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND4P03905 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MT-ND4P03905 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.8□□□□□ -1.96
MT-ND4P03905 RPL21P110-201ENST00000433345 446 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.8□□□□□ -1.96
MT-ND4P03905 RPL17P49-201ENST00000443728 411 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.8□□□□□ -1.96
MT-ND4P03905 AL929288.2-201ENST00000446368 407 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 RPL21P23-201ENST00000446654 460 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 RPL7P55-201ENST00000450522 746 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 PLGLA-201ENST00000465668 449 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.8□□□□□ -1.96
MT-ND4P03905 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MT-ND4P03905 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.8□□□□□ -1.96
MT-ND4P03905 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.8□□□□□ -1.96
MT-ND4P03905 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.8□□□□□ -1.96
MT-ND4P03905 AC092593.2-201ENST00000513866 913 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND4P03905 OR8K2P-201ENST00000524645 927 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AC106785.1-201ENST00000565935 262 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.8□□□□□ -1.96
MT-ND4P03905 AC023824.3-201ENST00000569003 562 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND4P03905 AC119501.1-201ENST00000603646 475 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AC112503.2-201ENST00000609005 552 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 uc_338.1-201ENST00000612113 180 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AL590240.3-201ENST00000621416 943 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND4P03905 AC244258.1-201ENST00000637553 1071 ntBASIC2.8□□□□□ -1.96
MT-ND4P03905 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.8□□□□□ -1.96
MT-ND4P03905 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.8□□□□□ -1.96
MT-ND4P03905 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
MT-ND4P03905 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND4P03905 AL161912.2-201ENST00000565707 3007 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
MT-ND4P03905 AF117829.1-206ENST00000621883 3802 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
MT-ND4P03905 MTCO1P6-201ENST00000481192 1384 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.79□□□□□ -1.96
MT-ND4P03905 AC025263.3-201ENST00000622965 1396 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
MT-ND4P03905 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.79□□□□□ -1.96
MT-ND4P03905 AC109780.2-201ENST00000413467 845 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 BX842559.1-201ENST00000419615 532 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AL606495.1-201ENST00000422100 813 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.79□□□□□ -1.96
MT-ND4P03905 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND4P03905 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.79□□□□□ -1.96
MT-ND4P03905 HSPD1P21-201ENST00000436541 245 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND4P03905 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.79□□□□□ -1.96
MT-ND4P03905 AC092641.1-201ENST00000440229 772 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 GAPDHP27-201ENST00000447427 1020 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AC140076.1-201ENST00000449897 361 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 RPL7P15-201ENST00000461190 712 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
MT-ND4P03905 RPS26P21-201ENST00000475397 348 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AC108860.1-201ENST00000484521 383 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.79□□□□□ -1.96
MT-ND4P03905 COL6A4P2-205ENST00000509855 506 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.79□□□□□ -1.96
MT-ND4P03905 RNU6-488P-201ENST00000515918 99 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 RNU6-416P-201ENST00000516265 103 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 RN7SKP282-201ENST00000516824 299 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 SNORD59.2-201ENST00000516873 68 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 RNU6-711P-201ENST00000517255 106 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 IGKV2D-36-201ENST00000518643 226 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 HIGD1AP6-201ENST00000521833 279 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 IGJP1-201ENST00000522682 475 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AP004371.1-201ENST00000525240 214 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND4P03905 AC109635.4-202ENST00000531666 412 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.79□□□□□ -1.96
MT-ND4P03905 AC055876.1-202ENST00000567053 138 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND4P03905 RN7SL622P-201ENST00000585292 275 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.79□□□□□ -1.96
MT-ND4P03905 OR4G1P-201ENST00000588632 938 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AC007566.2-201ENST00000603642 413 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 HSPE1P14-201ENST00000605812 302 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AL354976.1-201ENST00000613843 387 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AC243312.2-201ENST00000623340 601 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.79□□□□□ -1.96
MT-ND4P03905 AC084035.1-201ENST00000634543 607 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 AC127502.3-201ENST00000636170 1206 ntBASIC2.79□□□□□ -1.96
MT-ND4P03905 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
MT-ND4P03905 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms