Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.39■■□□□ 1.34
KDM3AQ9Y4C1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.39■■□□□ 1.34
KDM3AQ9Y4C1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.39■■□□□ 1.34
KDM3AQ9Y4C1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
KDM3AQ9Y4C1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
KDM3AQ9Y4C1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.39■■□□□ 1.33
KDM3AQ9Y4C1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
KDM3AQ9Y4C1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
KDM3AQ9Y4C1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 AC133552.2-202ENST00000575694 574 ntBASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM3AQ9Y4C1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 AC245052.3-201ENST00000450182 901 ntBASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 AC013268.1-206ENST00000638368 961 ntBASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 AC112229.1-201ENST00000639295 961 ntBASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
KDM3AQ9Y4C1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 AC005229.4-201ENST00000610085 2198 ntBASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 PKD1P6-201ENST00000343738 4769 ntBASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM3AQ9Y4C1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 TERF1P5-201ENST00000477545 1207 ntBASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 AC007322.4-201ENST00000509611 723 ntBASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.35■■□□□ 1.33
KDM3AQ9Y4C1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 AL137060.1-201ENST00000618151 2648 ntBASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.34■■□□□ 1.33
KDM3AQ9Y4C1 AF201337.1-201ENST00000520239 748 ntBASIC23.33■■□□□ 1.33
KDM3AQ9Y4C1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
KDM3AQ9Y4C1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.33■■□□□ 1.33
KDM3AQ9Y4C1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KDM3AQ9Y4C1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.33■■□□□ 1.33
KDM3AQ9Y4C1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.33■■□□□ 1.32
KDM3AQ9Y4C1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KDM3AQ9Y4C1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KDM3AQ9Y4C1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
KDM3AQ9Y4C1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KDM3AQ9Y4C1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.33■■□□□ 1.32
KDM3AQ9Y4C1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.33■■□□□ 1.32
KDM3AQ9Y4C1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.32■■□□□ 1.32
KDM3AQ9Y4C1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KDM3AQ9Y4C1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.32■■□□□ 1.32
KDM3AQ9Y4C1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KDM3AQ9Y4C1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KDM3AQ9Y4C1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
KDM3AQ9Y4C1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms