Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 OR7E47P-201ENST00000546390 1422 ntBASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV20A0A0B4J274 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 AC127496.7-201ENST00000625110 1798 ntBASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 CROCCP5-201ENST00000436658 830 ntBASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 MFSD11-216ENST00000590393 1141 ntBASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 AP001160.3-201ENST00000601484 763 ntBASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV20A0A0B4J274 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 AC055733.4-201ENST00000638462 1354 ntBASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 AP004607.7-201ENST00000527152 1677 ntBASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 MIR663A-201ENST00000385250 93 ntBASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 NCF1B-203ENST00000435988 1254 ntBASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 AC104771.1-201ENST00000603335 964 ntBASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 AL109923.1-201ENST00000618799 583 ntBASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 AC231657.2-201ENST00000624556 255 ntBASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV20A0A0B4J274 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV20A0A0B4J274 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 GPX1P1-201ENST00000388829 606 ntBASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV20A0A0B4J274 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms