Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.73■■□□□ 1.23
SHISA7A6NL88 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SHISA7A6NL88 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SHISA7A6NL88 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHISA7A6NL88 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.72■■□□□ 1.23
SHISA7A6NL88 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHISA7A6NL88 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SHISA7A6NL88 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.72■■□□□ 1.23
SHISA7A6NL88 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHISA7A6NL88 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHISA7A6NL88 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SHISA7A6NL88 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SHISA7A6NL88 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHISA7A6NL88 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SHISA7A6NL88 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SHISA7A6NL88 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.71■■□□□ 1.23
SHISA7A6NL88 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.71■■□□□ 1.23
SHISA7A6NL88 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.71■■□□□ 1.23
SHISA7A6NL88 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.71■■□□□ 1.23
SHISA7A6NL88 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.71■■□□□ 1.23
SHISA7A6NL88 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.71■■□□□ 1.23
SHISA7A6NL88 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.71■■□□□ 1.23
SHISA7A6NL88 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SHISA7A6NL88 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.71■■□□□ 1.23
SHISA7A6NL88 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHISA7A6NL88 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.7■■□□□ 1.22
SHISA7A6NL88 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.7■■□□□ 1.22
SHISA7A6NL88 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.7■■□□□ 1.22
SHISA7A6NL88 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHISA7A6NL88 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.7■■□□□ 1.22
SHISA7A6NL88 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHISA7A6NL88 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA7A6NL88 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA7A6NL88 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.69■■□□□ 1.22
SHISA7A6NL88 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA7A6NL88 AP004607.4-201ENST00000530158 1459 ntBASIC22.69■■□□□ 1.22
SHISA7A6NL88 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA7A6NL88 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.69■■□□□ 1.22
SHISA7A6NL88 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
SHISA7A6NL88 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA7A6NL88 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA7A6NL88 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA7A6NL88 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.69■■□□□ 1.22
SHISA7A6NL88 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.69■■□□□ 1.22
SHISA7A6NL88 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.69■■□□□ 1.22
SHISA7A6NL88 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.68■■□□□ 1.22
SHISA7A6NL88 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHISA7A6NL88 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHISA7A6NL88 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHISA7A6NL88 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
SHISA7A6NL88 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.68■■□□□ 1.22
SHISA7A6NL88 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SHISA7A6NL88 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.68■■□□□ 1.22
SHISA7A6NL88 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.68■■□□□ 1.22
SHISA7A6NL88 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.68■■□□□ 1.22
SHISA7A6NL88 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHISA7A6NL88 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHISA7A6NL88 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHISA7A6NL88 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHISA7A6NL88 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHISA7A6NL88 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHISA7A6NL88 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHISA7A6NL88 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SHISA7A6NL88 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.67■■□□□ 1.22
SHISA7A6NL88 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHISA7A6NL88 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.67■■□□□ 1.22
SHISA7A6NL88 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.67■■□□□ 1.22
SHISA7A6NL88 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.67■■□□□ 1.22
SHISA7A6NL88 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
SHISA7A6NL88 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHISA7A6NL88 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHISA7A6NL88 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
SHISA7A6NL88 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SHISA7A6NL88 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA7A6NL88 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA7A6NL88 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.66■■□□□ 1.22
SHISA7A6NL88 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.66■■□□□ 1.22
SHISA7A6NL88 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.66■■□□□ 1.22
SHISA7A6NL88 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.66■■□□□ 1.22
SHISA7A6NL88 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.66■■□□□ 1.22
SHISA7A6NL88 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.66■■□□□ 1.22
SHISA7A6NL88 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA7A6NL88 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.66■■□□□ 1.22
SHISA7A6NL88 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA7A6NL88 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
SHISA7A6NL88 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.66■■□□□ 1.22
SHISA7A6NL88 AC004854.2-201ENST00000608450 1441 ntBASIC22.65■■□□□ 1.22
SHISA7A6NL88 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SHISA7A6NL88 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SHISA7A6NL88 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHISA7A6NL88 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SHISA7A6NL88 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.65■■□□□ 1.22
SHISA7A6NL88 AC104771.1-201ENST00000603335 964 ntBASIC22.65■■□□□ 1.22
SHISA7A6NL88 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHISA7A6NL88 AC144652.1-201ENST00000609974 1624 ntBASIC22.64■■□□□ 1.22
SHISA7A6NL88 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SHISA7A6NL88 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.64■■□□□ 1.21
SHISA7A6NL88 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.64■■□□□ 1.21
SHISA7A6NL88 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.64■■□□□ 1.21
SHISA7A6NL88 AC137761.2-201ENST00000561729 223 ntBASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms